| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1290 |
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| Symbol | pilW |
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| ID | 1223602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1640987 |
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| End bp | 1641739 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637241153 |
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| Product | putative type 4 fimbrial biogenesis transmembrane protein |
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| Protein accession | NP_522849 |
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| Protein GI | 17549509 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.791156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCG CATCGCACCG CAAGCAGTGG CGGCCAGCCG TCCGCCAGTC AGGCACGAGC
CTGATCGAAC TCATGATTGC CATGGTCATC TCGCTGGTCA TCCTGAGCGG CGTGGTGGTG
GTCTTCATCA ACATGAAGCA ATCGTTCACG AACCAGGACC AGTTGGCCCT GCTGGAGGAC
AACGAGCGGC TGGCGCTGTC GATCCTGACC GGCACCGCGC AATCGGCGGG GTACTTCCCC
GATCCGGTCA ACAATACCCT GGCATCGCTG CTGATCGCCG ATTCCACGGC CTCGTACGGA
CCGCTGGTGG CCGGCCAGGC CGTCAACGGA ACGACCGGGA CGGGAACCGG CAGCGCCAGC
GACAAGCTGA CCCTGCGCTA TGCCACCGCC TCCGGCGACG GCATCCTGAA CTGTCTGGGC
GGCACCAACG CGTCCGGTAC GACCCAGGTT TACGTCAACA CCTTTTCGAT CAGTTCCGCC
AATGAGCTGC AGTGTTCGCT CAATGGCGCA ACAGCCGTCC CGCTGGTGAG CGGCGTGTCC
GGGTTCAGCG TGACGTATGG CGTCGATACC AATGGCAACG GCTATGTCGA CACCTACATG
TCCGCCACCC AGGTGCAGTC GGGCGGGTAC TGGGCGCTGG TCCGGTCCAT CCGGGTCACG
CTGACGTTCA CGACGTCGCT CTCGGTCTCC GGCGGACAGA CCCAGACAAC GCAATGGATC
CAGAACATCA GCCTGATGGG GCGCGTCACA TGA
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| Protein sequence | MSAASHRKQW RPAVRQSGTS LIELMIAMVI SLVILSGVVV VFINMKQSFT NQDQLALLED
NERLALSILT GTAQSAGYFP DPVNNTLASL LIADSTASYG PLVAGQAVNG TTGTGTGSAS
DKLTLRYATA SGDGILNCLG GTNASGTTQV YVNTFSISSA NELQCSLNGA TAVPLVSGVS
GFSVTYGVDT NGNGYVDTYM SATQVQSGGY WALVRSIRVT LTFTTSLSVS GGQTQTTQWI
QNISLMGRVT
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