| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1287 |
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| Symbol | pilE1 |
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| ID | 1223599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1636604 |
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| End bp | 1637071 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637241150 |
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| Product | type 4 fimbrial biogenesis signal peptide protein |
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| Protein accession | NP_522846 |
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| Protein GI | 17549506 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.54364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCTC AACAGACTGC TTCTGCCATC CGGCATTCGG CGGGCTTCAC GCTCGTCGAG
CTGATGGTCA CGCTCGCCAT CGTGGCGATC CTGGCCGCGA TCGCCTATCC GTCCTACAGC
AGCTACATCA TGAAGTCGCA CCGGGCCGAG GCCAAGACGG CCCTGCTGGA CCTGGCCTCG
CGCCAGGAGC GCTATTTCGC GCTGCAGAAC AACTACGCGA GCACGCCGTC CGCGCTGGGC
TACGCCGGAA CGGCGTTTCC CGTCGCGCTG CAGACGAACG GGCAGACCTA TTACCAGCTG
TACGTGCAAG TCACGGGGTC GCCGGGCACG AGCACGCTGC CCGGATTCTC GGCCTCGGCC
GTGCCGGCCA ACCCCGGTCC CCAGCAGTCC GACGCCTGCG GTACCTACAC GATCAATCAG
CTGGGCGTGC AGGGCAACAG CGGCAATACC GCGTCGCAGT GCTGGTAA
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| Protein sequence | MKSQQTASAI RHSAGFTLVE LMVTLAIVAI LAAIAYPSYS SYIMKSHRAE AKTALLDLAS
RQERYFALQN NYASTPSALG YAGTAFPVAL QTNGQTYYQL YVQVTGSPGT STLPGFSASA
VPANPGPQQS DACGTYTINQ LGVQGNSGNT ASQCW
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