| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1286 |
|---|
| Symbol | scrR |
|---|
| ID | 1223598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1634910 |
|---|
| End bp | 1635944 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637241149 |
|---|
| Product | putative DNA-binding sucrose operon transcriptional repressor transcription regulator protein |
|---|
| Protein accession | NP_522845 |
|---|
| Protein GI | 17549505 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.597152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGCA TGGTATCGAT CCCACAAAAA CGTCCGACCA TCCGGGATGT CGCCACGCTC
GCCGGCGTGT CGACATCGAC GGTGTCGCGC GTGCTGAACA ACTCCGGCTA CGTCAAGGCC
GAGGTTCGCG AGCGTATCGA GGCGGTGGTC TCGCGCATGC ACTACACGCC GTCGGAACTG
GCCAAGCAGC TCAAGTCGCA GCGCTCGGGG CTGGTCGGGG TGATCATTCC GAAGATCAAT
TCGTACACCA CGAGCGAGAT CGTCGCGGGA ATTTCCGCGA CGCTCGCGCC GCTGCGCTAC
CAGATGCTGC TGGCCAACAC GGCCAACTCC GTGGCGGAGG AGGCGACGGC CTACGATCTG
TTCCGCCGGC AGCGCGTCGC CGGGGTGCTG CACCTGGCGA CCACCGTCAA CACGGACCTG
ATCGACGCGA TCCGGGAGGC CGGTCTGCCC ATCGTCATGA TCGGGCAGGA CGCCAGCCAC
CTGGGCATCA CCAGCGTGAT CCAGAACGAG CGGTCCGCGG CCCGGCAGAT CATGGAGCAC
CTGCTTGCGC AAGGGCACAA GCGGGTCGGG CTGGTGACGG TGGACGAGGA GGACATCCAG
GTCGGCCGCG AGCGGACGGC CGGCTATCTC GATGCCCTGC AGGTGCACGG GCTGCCGGTG
GACCCGGCGC TGATCATCCG CGCGAGCTTC CGCTCCGGCG CCGGAGAAGA GGCCGCGGAG
CAACTGCTGC GCGCCAGTGG CGATGCGCGC TGCACGGCCA TCCTGGCGGT CACCGACCGG
CTGGCGGTGG GCGTCATGGC GTGCCTGCAC GACCACGGCC TGCGTGTGCC CGACGACATG
GCGGTCGCCG GCATGGGCGA TAGCGACACG GCCAGCATGG TCCGCCCGGC CCTGTCGACG
GTGCACTACG ACTACGCCGG CACGGGGGCC GAAGCCGCCC GGCTGATGCT CCAGCTCTGG
GAGACCAATA GCAATAGCGC CGAGGTTGAG CGCATCGTCA TGCCGTACCG GCTGGCGCTG
CGCCGCAGCA CCTAG
|
|---|
| Protein sequence | MPGMVSIPQK RPTIRDVATL AGVSTSTVSR VLNNSGYVKA EVRERIEAVV SRMHYTPSEL
AKQLKSQRSG LVGVIIPKIN SYTTSEIVAG ISATLAPLRY QMLLANTANS VAEEATAYDL
FRRQRVAGVL HLATTVNTDL IDAIREAGLP IVMIGQDASH LGITSVIQNE RSAARQIMEH
LLAQGHKRVG LVTVDEEDIQ VGRERTAGYL DALQVHGLPV DPALIIRASF RSGAGEEAAE
QLLRASGDAR CTAILAVTDR LAVGVMACLH DHGLRVPDDM AVAGMGDSDT ASMVRPALST
VHYDYAGTGA EAARLMLQLW ETNSNSAEVE RIVMPYRLAL RRST
|
|---|
| |