| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1221 |
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| Symbol | nirD |
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| ID | 1223533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1553561 |
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| End bp | 1553902 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637241086 |
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| Product | nitrite reductase NADPH small subunit |
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| Protein accession | NP_522782 |
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| Protein GI | 17549442 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.194691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.590644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCCA ATCATTGGAC CGCCATCTGC GCGCTGGACG ACATCGTGCC CAACACCGGC
GTCTGCGCGC TGGTCGGGGG GGCGCAAATC GCCGTGTTCC ACGTGGCCGG CGATGCGCCG
CGCCGCGTCT ACGCCATCGG CAACTACGAC CCGAACGCGG ACGCCGCCGT GCTCTCGCGC
GGCCTGGTCG GCAACCTGGG CGAGCGCATC GTGGTGGCTT CGCCCATCTA CAAGCAGCAC
TTCGACCTGG CCACCGGCGA GTGCCTGGAA GCCCCGGCCA ACTCGGTGCC GGCCTACGCC
GCCAAGGTGG AAGACGGCAA GGTCTGGATC GCACAGCAAT GA
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| Protein sequence | MQANHWTAIC ALDDIVPNTG VCALVGGAQI AVFHVAGDAP RRVYAIGNYD PNADAAVLSR
GLVGNLGERI VVASPIYKQH FDLATGECLE APANSVPAYA AKVEDGKVWI AQQ
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