Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1105 |
Symbol | otsA |
ID | 1223417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1399713 |
End bp | 1401110 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240970 |
Product | alpha,alpha-trehalose-phosphate synthase |
Protein accession | NP_522666 |
Protein GI | 17549326 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.680742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.435396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC TGATCGTGGT CTCCAACCGC GTGGCGCCCA TCGCCGAGGG CCAGGCGAGC GCCGGCGGGC TGGCGGTCGG CGTGTACGAC GCGCTGCGCG ATACCGGCGG CGTGTGGTTC GGCTGGAGCG GCGAGATCGC GCCGGGCGCG TCGGGCGAGC CGTCCATCGC CGCCAAGGGC GCCATCACCT TCGCCACCGT GGGCCTGAGC CGCCGCGACT ACGACCAGTA CTACCGCGGC TTCGCCAATG CCACGCTGTG GCCGGTGTTC CACTACCGCG TCGATCTGGC GCGCTACGAG CGCCAGGAGT ACCACGGCTA CCGGCGCGTC AACACGCAGT TCGCGCATCA GCTCAAGGCG CTGGTGCAGC CCGACGACAT CCTGTGGGTG CACGACTATC ACCTGATCCC GTTCGCAGCC GAATGCCGGG CGCTGGGGCT GCGCAACCGC ATCGGTTTCT TCCTGCACAT TCCGTTTCCG TCGCCGGAGA TCCTGACGAC GATCCCGCCG CACGAAGAGC TGATGCGCGC GCTGTGCGCC TACGACCTGC TCGGCTTCCA GACCGAGACC GATCGCGTCG CCTTCTACGA CTACATCGAA CGCGAGGCGC GCGGCTACAT CGAGAACAAG GAGCACAACG GGCCGGTGCA CGCCTACGGC AACACGCTGC GCGCCGAGGT CTACCCGATC GGCGTGCATC CGGACGAGAT CGCGCGGCAG GCGGTGTCGT CGCTGGCGCG GCGCAATCCG TTCGCGCGCG AGGCCGATGC GAGCGGCGGC CGCCCGCTCA AGCTCATCAT GAGCGTGGAC CGGCTGGACT ATTCCAAGGG CCTGCCCGAA CGCTTCCGCG CGTTCGAGCA GTTGCTGGAC GATTTTCCCG ACCACCGGCG GCACGTGACC TTCGTTCAGA TCGCGCCGAC CTCGCGGCAG GATGTGCAGA GCTACCAGCA GATCCGCCAG CGGCTGGAGG CCGAATCGGG CCGCATCAAC GGCAAGCATT CGGAACTGGA CTGGACACCG ATCCGCTACA TCAACAAGCA GTACGACCGG CGCATGCTGA TGGCGCTGTT CCGCGCCTCG CACATCGGCT ATGTCACGCC GCTGCGCGAC GGCATGAACC TGGTGGCCAA GGAATACGTG GCGGCGCAGG ACCCGGAGGC GCCGGGCGTG CTGGTGCTGT CGCGCTTCGC GGGCGCGGCG CGCGAGCTCG ATGCCGCGCT GATCGTCAAT CCGTATGACA CGCGCGGCAT GGCCGAGGCG CTCAACCGCG CGCTGACGAT GCCGCTCGAA GAGCGCAAGG CGCGCCACGC CCACATGATG GACCGGCTGC GCGCGGCCGA CCTCACGGCA TGGCGCGAAC GCTTTCTGGC CGATCTGCGC GGCGCATCGG CCCGCTAG
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Protein sequence | MSRLIVVSNR VAPIAEGQAS AGGLAVGVYD ALRDTGGVWF GWSGEIAPGA SGEPSIAAKG AITFATVGLS RRDYDQYYRG FANATLWPVF HYRVDLARYE RQEYHGYRRV NTQFAHQLKA LVQPDDILWV HDYHLIPFAA ECRALGLRNR IGFFLHIPFP SPEILTTIPP HEELMRALCA YDLLGFQTET DRVAFYDYIE REARGYIENK EHNGPVHAYG NTLRAEVYPI GVHPDEIARQ AVSSLARRNP FAREADASGG RPLKLIMSVD RLDYSKGLPE RFRAFEQLLD DFPDHRRHVT FVQIAPTSRQ DVQSYQQIRQ RLEAESGRIN GKHSELDWTP IRYINKQYDR RMLMALFRAS HIGYVTPLRD GMNLVAKEYV AAQDPEAPGV LVLSRFAGAA RELDAALIVN PYDTRGMAEA LNRALTMPLE ERKARHAHMM DRLRAADLTA WRERFLADLR GASAR
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