Gene RSp1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1019 
SymbolepsP 
ID1223331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1285769 
End bp1286206 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID637240884 
Productlow molecular weight protein-tyrosine-phosphatase 
Protein accessionNP_522580 
Protein GI17549240 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.523657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.729784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CCATTCTTGT CGTGTGTATC GGCAACATCT GCCGCAGTCC GATGGCGCAG 
GCGCTGCTGC GGCAGTCGCT GCCGGGCGTG AGCGTCATCT CGGCGGGCAT CGGCGCGCTG
TCGGGCTACC CGGCCGATCC GAGCGCCGTC GAGGTGATGG CCCACCACGG CATTGATATC
TCCGAGCACC GCGCGCAGCA GCTCACCGGT TCGCTGGTCA GCCGTGCCGA CCTGATCCTG
GTGATGGACG GTGCGCAGAA GCAAGAGATC CAATCGCGCC ACCCCGCCAA GACCGGCAGC
GTGTTCCGGT TGGGCGAGAT GGAGCAGTTC GATATCGCGG ACCCGTACCG CAAGCAGCTG
ACCGCCTTCG AAGAGGCGCT CGAAATGATC CAGCGCGGTG TCGACGCCTG GGTGCCCCGC
ATACGGGCAC TCGGTTGA
 
Protein sequence
MIKTILVVCI GNICRSPMAQ ALLRQSLPGV SVISAGIGAL SGYPADPSAV EVMAHHGIDI 
SEHRAQQLTG SLVSRADLIL VMDGAQKQEI QSRHPAKTGS VFRLGEMEQF DIADPYRKQL
TAFEEALEMI QRGVDAWVPR IRALG