| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1018 |
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| Symbol | epsB |
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| ID | 1223330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1283475 |
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| End bp | 1285730 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240883 |
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| Product | EPS I polysaccharide export transmembrane protein |
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| Protein accession | NP_522579 |
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| Protein GI | 17549239 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.646097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.76334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA ACCTCTCTCA GCCGCCAGCC GTCAACGCAC CGGAAAGCGA GCTCGACCTC
GTTCGCTACC TGGACGTTCT GGTGGCCAAT CGCTGGCTGA TCGCGGGCAT TGCCGCGGTT
GTCATGCTGC TCGGCGCGAC CTATGCCTTC CTGGCGCGCC CGGTCTACGA GGCCGATGTC
CTGGTGCAGG TGGAAGACAA TCCCAACAGC GCCAAGAGCC TGCTGGGCGA TGTGTCGAGC
CTGTTCGATG TGAAGACCGA CGCCAACGCC GAGATCGAGA TCCTGCGATC GCGCATGGTG
GTGGGCAAGG CGGTCGACAA TCTGCATCTC TACATCACGG CCAAGCCGCA CTACTTTCCG
CTGATCGGCG CGTGGGTTGC CAGCCGGGCG AAGCAACTGT CCGAGCCCGG GCTGTTCGGC
CTGGGCGGCT ATACCTGGGG CACGGAGCTG ATCGACGTGG ACGGCTTCGA TGTGCCGGAG
GCGCTCGAAG GCCAGCCGTT CAAGCTGACC GCGCTGGGCA ACGGGCGCTA CCGGCTGGAA
AACAAGAGCC TGGATACGCC CATCGAGGGC GTGGTCGGCG AGCCGCTCGA GGCGAAGCAG
AGCGTCGGGA CGATCCAGCT GCTGGTCAAT ACGCTGGCCG CCAAGGCCGG CGCCGCCTTC
GAGCTGCAGC GCGACTCGCG GCTCAAGACG CTGGAGATGC TGCAGGACAA GCTCAAGATC
TCCGAGAAGG GCAAGCAAAG CGGCATCATC GGCGCTTCGC TGGAAGGCAA GAATCCCGCG
CTGACCGCCG CGATCATGAA CCAGATCGCC ACCGAGTACG TGGCCCAGAA CATCAAGCGC
AAGGCCGAAG AGGCGGAACG CTCGCTGGTC TTCCTGGATG GCCTGCTGCC GCAGCTCAAG
CTGCAGCTCG AGCGCGCGGA AATGAAGTAC AACGAGATGC GCAATCTGCG CGGGACCTTC
GACCTGAGCG AAGAGGGCAA GGCGTTCCTG CAGGAGAGCG TGACCACCGA GACCAGCCTG
CAGGAGCTCA AGCAGAAGCG CGCCGAGCTG CTGACCCGCT TTACCGCGAG CCATCCGGGC
GTGCAAGCCA TCGATCAGCA GATCGCGGTG ATGAGCGGGA AGGTCGGGGC CATGACGCGC
CGGCTCAAGT CGCTGCCCAA CATCGAGCAG GACACCGTGC GGCTGATGCG CGACGTCCAG
GTCGACAACG ATCTTTACGT GAGCTTGCTC AACGACATGC AGCAGCTCAA GCTGGTCAAG
GCCGGCAAGG TGGGCAACGT GCGCCTGGTC GACGGCGCCG CGGTGCCGGA AGAGCCGGTG
AAGCCCAAGA AGCTGACGGT GACGGCGCTG GCCGGCGTGC TGGGGGTGGT GCTGGGCGTG
GTGGCGGCGT TCGTGCGCAA TACGCTGTTC GGCGGCATCA CCGAGCCGCA GGACATCGAG
GAGCACACCG GGTTGAGCGT CTACGCCACC GTGCCGCTGT CGGATGTGCA GATCGACCTG
AGCAGCCAGC TGACGACGCA CAAGCGCGGC CAGTACCTGC TGGCCAGACG GGTGCCTGAC
GACCCGTCGA TCGAAAGCCT GCGCAGTCTG CGCACCGCGC TGCAGTTCGC GATGCAGGAC
TCGGGCAACA ACCTGGTGGT GCTGACCGGG CCGACCCCGG GGGTGGGCAA GTCCTTCGTG
TCCGCCAACC TGGCCGCGGT CATCGCGACC GGCGGCAAGC GGGTCCTGCT GGTGGACGCC
GACATGCGCA AGGGCTACCT GCACCAGTAT TTCGGCAAGG ACCGCAAGCC CGGCCTGCTG
GATCTGCTGG CGGGCGACCG CTCGATCGAG CAGGTGGTGC ATCGCGAGGT CGTCCCCGGG
CTGGACTTCA TCGCGACGGG CCTGTTCCCG CACAACCCGT CCGAGCTGCT GCTCAATCCG
CGCATGGTCG AGCTGATGGA TACCTTCCGC GCGCAGTACG ACCTGGTGCT GATCGACACG
CCGCCGGTGC TGGCCGTGAC CGATACCGCC ATCCTGGCCG CGCGCGCCGG AACGGTGCTG
ATGGTCACCC GCTTCGAGCG CAGCACGCTG GGCGAGATCC GCGAGACGAT CAAGCAGCTC
CAGCACGCCA ATGTCGAGGT CCGGGGCGTG GTGTTCAACG CGCTCGACCC CAATACCTAT
CGCTATGGAT ACGGCTCGCG TTACGGGCGC TACCGCTACG TGCAGTACGG GTACACGAGC
AAGCCATCGG CGGAGGCCGA GGCCGAATCC GCGTAG
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| Protein sequence | MTQNLSQPPA VNAPESELDL VRYLDVLVAN RWLIAGIAAV VMLLGATYAF LARPVYEADV
LVQVEDNPNS AKSLLGDVSS LFDVKTDANA EIEILRSRMV VGKAVDNLHL YITAKPHYFP
LIGAWVASRA KQLSEPGLFG LGGYTWGTEL IDVDGFDVPE ALEGQPFKLT ALGNGRYRLE
NKSLDTPIEG VVGEPLEAKQ SVGTIQLLVN TLAAKAGAAF ELQRDSRLKT LEMLQDKLKI
SEKGKQSGII GASLEGKNPA LTAAIMNQIA TEYVAQNIKR KAEEAERSLV FLDGLLPQLK
LQLERAEMKY NEMRNLRGTF DLSEEGKAFL QESVTTETSL QELKQKRAEL LTRFTASHPG
VQAIDQQIAV MSGKVGAMTR RLKSLPNIEQ DTVRLMRDVQ VDNDLYVSLL NDMQQLKLVK
AGKVGNVRLV DGAAVPEEPV KPKKLTVTAL AGVLGVVLGV VAAFVRNTLF GGITEPQDIE
EHTGLSVYAT VPLSDVQIDL SSQLTTHKRG QYLLARRVPD DPSIESLRSL RTALQFAMQD
SGNNLVVLTG PTPGVGKSFV SANLAAVIAT GGKRVLLVDA DMRKGYLHQY FGKDRKPGLL
DLLAGDRSIE QVVHREVVPG LDFIATGLFP HNPSELLLNP RMVELMDTFR AQYDLVLIDT
PPVLAVTDTA ILAARAGTVL MVTRFERSTL GEIRETIKQL QHANVEVRGV VFNALDPNTY
RYGYGSRYGR YRYVQYGYTS KPSAEAEAES A
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