| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1017 |
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| Symbol | epsC |
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| ID | 1223329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1282106 |
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| End bp | 1283245 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240882 |
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| Product | udp-n-acetylglucosamine 2-epimerase protein |
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| Protein accession | NP_522578 |
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| Protein GI | 17549238 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
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| TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.562201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.405057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATCACA CTATGAAAAA AGTCCTGGTT GTATTCGGTA CGCGGCCGGA AGCCATCAAG
ATGGCGCCGC TGGTCAAGGC GCTGCAGGCC GATACGTCGA TGCAGTGCGG TGTGTGCGTG
ACGGCCCAGC ACCGGGAGAT GCTCGACCAG GTGCTGCGCC TGTTCGACAT CCGCCCGGAC
TATGACCTCA ACGTCATGAA GCCGGGACAG GACCTGTACG AGCTCACCAG CAATATCCTG
ACGGGCGTGA AGTCCGTGCT GGAGTCGTTC GCGCCCGATC TGGTGCTGGT GCACGGCGAT
ACCAGCACGA CGCTGGCGAC CACGCTCGCC GCCTACTACA AGCAGGTGCC GGTCGGGCAT
ATCGAGGCCG GCCTGCGGAC CGGCAACCTC TACTCGCCCT GGCCGGAGGA GGCCAACCGC
AAGGTCACCG GGTCGTTGGC GGCCCTGCAC TTCGCGCCCA CCGAGCGCTC GCGCCGCAAC
CTGCTCAATG AAGGCGTGCC GGCCGACGCG GTGGTCGTGA CCGGCAACAC CGTCATCGAC
GCGCTACTGT CGGTGCGGCA GCGCCTGCAG ACCGACACCG CCCTGTGCCG GCATACCGCC
AGCCTGATCC CGTATCGCAT CGGCGAGCGC CGCATCGTGC TGGTGACCGG CCACCGGCGC
GAGAGCTTCG GTGACGGCTT CGAGCGCATC TGCGCGGCCC TGGCCAGCAT CGCGCGTGCG
CATCCGGATG TCGACATCGT CTATCCCGTG CACCTGAATC CCAATGTGCG CGAGCCGGTG
GGCCGCCTGC TCAAGGGCAT CGACAACATC CACCTGATCG AGCCGCTGGA CTACCTGCCG
TTCGTCTACC TGATGGACAA GGCCCACATC ATCCTGACCG ATTCGGGCGG CATCCAGGAG
GAAGCGCCGT CGCTGGGCAA GCCCGTGCTG GTCATGCGCG ACACCACCGA GCGGCCCGAG
GCCGTCGAGG CCGGCACCGT CAGGCTGGTC GGCACCTCGG TCGATGCGCT GGTCGACAGC
GCGACCACGC TGCTGAACGA CGACTCCGCC TACGAGGCCA TGAGCCGCGC ACACAACCCT
TACGGCGATG GTGCTGCCAG TGCGCGCATC ACCCGCGCCA TCCAAGCTTA TTTCGCCTGA
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| Protein sequence | MDHTMKKVLV VFGTRPEAIK MAPLVKALQA DTSMQCGVCV TAQHREMLDQ VLRLFDIRPD
YDLNVMKPGQ DLYELTSNIL TGVKSVLESF APDLVLVHGD TSTTLATTLA AYYKQVPVGH
IEAGLRTGNL YSPWPEEANR KVTGSLAALH FAPTERSRRN LLNEGVPADA VVVTGNTVID
ALLSVRQRLQ TDTALCRHTA SLIPYRIGER RIVLVTGHRR ESFGDGFERI CAALASIARA
HPDVDIVYPV HLNPNVREPV GRLLKGIDNI HLIEPLDYLP FVYLMDKAHI ILTDSGGIQE
EAPSLGKPVL VMRDTTERPE AVEAGTVRLV GTSVDALVDS ATTLLNDDSA YEAMSRAHNP
YGDGAASARI TRAIQAYFA
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