| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1003 |
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| Symbol | xpsR |
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| ID | 1223315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1264272 |
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| End bp | 1265192 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240868 |
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| Product | transcription regulator XpsR transcription regulator protein |
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| Protein accession | NP_522564 |
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| Protein GI | 17549224 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0016444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAACAGA AGCTCATCTT CTCGCGCGAA CAATTGGACA AGTACTTTGC TTCCTATGTC
GGCATGGAGG GGGGCAACCC CGCCGGGGCT GTCTGGTTCT GCGACAGGGA TCCGCACCCA
TGGACAGAGT CGCTGGTTGC CCCGCTGGGG CCGCGTGAGC AGCCCAACGC CTGGGGCACG
GTCTTCCGCG CACGCAACCG GGACAGCATG GAGCGGTGGC AATCGCATCA GAAGATCGCG
CGGATCATGG CGGCCGCGCG TGCGGAGACC CATCGGCGGC CGCAGAGCGA ATGCGACTGG
AAGCATTACT TTGCGGACCT GCTCTATGCG CCGAACGGCG CCGAGTTCAA GCTCAGCCTG
TTTCCGCTGC CCGCGCAGCA GATCGGCGAC ACGCCCTGGT CGCGGGCATT CCGCGGGCAG
CCGGCGCTGG TTCCGAAGCA GCGCTATGTC GATCTGTGCC GGACCGGAAG CCGGTTCCGC
TTCATCTCGA AGATCCGGGA ACGCTGGAGG CCCAAGATCG TGCTGTGCTT CGGCGAGCGG
CACATGGACG ACTACGTGCA AGCCTTCGGC CTGCAGGCGG CCGCAACCCG CCAGTTCATT
CTTCAGCCGG CCGATCTCGC CAAGACGCTG CAGGTGCTCG AGCACGACGG CACCACCTGG
ATCATCAGTC CGCCGCTGGC CGGCGCTTCG GGGCTGACTT CCGACGTGCT GCTCGAAGCG
ATGGGGCGCT ATATCGCGCG TTGGCTGGCG CCGGCCGATT TTCCCCGGCT GCAGGAAAGC
AGCGGGGTCA GCCTGCTCAC GAAGGAACGG GAGGATCCGT TCGGCGACGG CCGGGGAGGC
CGAGCAACGT ACCCGGCAAC CGGACGCGTA CCGTTTCCGC CGCCAGGCAG GGACGACATC
GCTGGGCGGG TTGCTTACTG A
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| Protein sequence | MEQKLIFSRE QLDKYFASYV GMEGGNPAGA VWFCDRDPHP WTESLVAPLG PREQPNAWGT
VFRARNRDSM ERWQSHQKIA RIMAAARAET HRRPQSECDW KHYFADLLYA PNGAEFKLSL
FPLPAQQIGD TPWSRAFRGQ PALVPKQRYV DLCRTGSRFR FISKIRERWR PKIVLCFGER
HMDDYVQAFG LQAAATRQFI LQPADLAKTL QVLEHDGTTW IISPPLAGAS GLTSDVLLEA
MGRYIARWLA PADFPRLQES SGVSLLTKER EDPFGDGRGG RATYPATGRV PFPPPGRDDI
AGRVAY
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