| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0996 |
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| Symbol | ttuC2 |
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| ID | 1223308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1255971 |
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| End bp | 1257056 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240861 |
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| Product | tartrate dehydrogenase oxidoreductase protein |
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| Protein accession | NP_522557 |
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| Protein GI | 17549217 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.932146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0127706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACAT ACCGTATCGC GACCATTCCC GGCGATGGCA TTGGCAAGGA GGTCGTGCCG
GCCGGGCGTG AAGTCATGGA AGCGCTCGCC GCCGCGGGCG CGGGCTTTCG CTTTGAATTC
GAGAACTTCG ACTGGGGCGG TGACTACTAC CGCCAGCACG GCGCGATGAT GCCGGCGGAC
GGGCTGGACG CCCTGCGCGG CAAGGACGCC ATCCTGTTCG GCTCGGCCGG CGATGCGCAG
ATTCCCGATC ACATCACGCT GTGGGGCCTG CGCCTGAAGA TCTGCCAGGG CTTCGACCAG
TACGCGAACG TGCGCCCGAC GCGCATCCTG CCCGGCATCG ATGCGCCGCT CAAGCGCTGC
GGCCCGCAAG ACCTGGACTG GGTGATCGTG CGCGAGAACT CGGAAGGGGA ATACGCGGGC
GTGGGCGGCC GCGTGCACCA GGGGCATCCG ATCGAGGCCG CCACCGACGT GTCGATGATG
ACGCGCGCCG GCGTCGAGCG GATCATGCGC TTCGCCTTCA GGCTGGCGCA GTCGCGCCCG
CGCAAGCTGC TGACCGTGAT CACCAAGTCC AACGCGCAGC GCCACGCCAT GGTGATGTGG
GACGAGATCG CCGTGCAGGT GTCGAAGGAA TTCCCCGACG TGCAGTGGGA CAAGGAACTG
GTCGATGCGG CGACGGCCCG CATGGTCAAC CGGCCGGCCT CGCTCGACAC CATCGTGGCG
ACCAACCTGC ACGCCGACAT CCTGAGCGAC CTGGCGGCGG CGCTGGCCGG CAGCCTGGGC
ATCGCCCCGA CCGGCAACAT CGATCCCGAA CGCCGCTATC CGTCGATGTT CGAGCCGATC
CACGGCTCGG CCTTCGACAT CATGGGCAAG GGGCTGGCCA ACCCGGTCGG CACGTTCTGG
TCGGTGGTGA TGCTGCTGGA GCACCTGGGC GAGCAGGCCG CCGCGCGCCG CCTGATGCAG
GCCATCGAGG CCGTGACCGC CAACCCCGCG CTGCATACGC GCGATCTGGG CGGCAATGCC
ACCACGGTGC AGGTCACGCG GGCGGTCTGC GAGTGCCTGG CGGTCTCGCA GGCGCAAGCC
GCATGA
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| Protein sequence | MKTYRIATIP GDGIGKEVVP AGREVMEALA AAGAGFRFEF ENFDWGGDYY RQHGAMMPAD
GLDALRGKDA ILFGSAGDAQ IPDHITLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
GPQDLDWVIV RENSEGEYAG VGGRVHQGHP IEAATDVSMM TRAGVERIMR FAFRLAQSRP
RKLLTVITKS NAQRHAMVMW DEIAVQVSKE FPDVQWDKEL VDAATARMVN RPASLDTIVA
TNLHADILSD LAAALAGSLG IAPTGNIDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW
SVVMLLEHLG EQAAARRLMQ AIEAVTANPA LHTRDLGGNA TTVQVTRAVC ECLAVSQAQA
A
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