Gene RSp0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0976 
SymbolnarJ 
ID1223288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1231826 
End bp1232506 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID637240841 
Productputative respiratory nitrate reductase oxidoreductase protein 
Protein accessionNP_522537 
Protein GI17549197 
COG category[C] Energy production and conversion 
COG ID[COG2180] Nitrate reductase delta subunit 
TIGRFAM ID[TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.368181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CTTCGCTGTA CCACCTGCTC TCCACCCTGC TCGCCTACCC CGAGCCGGAG 
CTGCTGGACG CCCTGCCCGA GATCGACCGC CTGCTCAGCG CCACCCCCGA TGCACACCGG
CGGCTGGCGC CGCTGCTCGA CACGCTGCGC GGCACCGATC TCATCACCTT GCAGGAACAC
TACGTTGCCA CCTTCGACCG TAACCCGTCG CATGCGCTGC ATCTGTTCGA GCACGTGCAC
GGCGAGAGCC GCGACCGCGG CCAGGCCATG GTCGACCTGA TCGAGGAGTA CCGCAAATAC
GGCGTCGAGC CCGCTGCCAA CGAGCTGCCG GACTACGTGC CGCTGTTCCT GGAAGTGCTC
GGCCACATGG ACGCGACCGG GCACGGCGAG CAAGCCACGG CCTTGCTGGG CGACGCCATC
CACGTGCTGG CCGCCGTCGG CGAGCGCCTG GCGCGCGACG GCACATCCTA CGCCGCCGTC
TTCGATGTCC TGCTCACGCG CAGCGACGTG CAGCCCCAGC CGCTGACCGA GCCGCCCATC
CGCGACATGG ACGAGGCCAT GGAGCACTTC GGCCCCGGCG CGGACGGCGT CGAGCCGCTG
CTGCGCCCCG CGCCGGCGGC GGAGCAGCCC GTGCAGTTCC ACCCGCGCAA GGGCGCGGCT
GCGCACCCCA CCCCTCTGTG A
 
Protein sequence
MTQPSLYHLL STLLAYPEPE LLDALPEIDR LLSATPDAHR RLAPLLDTLR GTDLITLQEH 
YVATFDRNPS HALHLFEHVH GESRDRGQAM VDLIEEYRKY GVEPAANELP DYVPLFLEVL
GHMDATGHGE QATALLGDAI HVLAAVGERL ARDGTSYAAV FDVLLTRSDV QPQPLTEPPI
RDMDEAMEHF GPGADGVEPL LRPAPAAEQP VQFHPRKGAA AHPTPL