Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0976 |
Symbol | narJ |
ID | 1223288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1231826 |
End bp | 1232506 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637240841 |
Product | putative respiratory nitrate reductase oxidoreductase protein |
Protein accession | NP_522537 |
Protein GI | 17549197 |
COG category | [C] Energy production and conversion |
COG ID | [COG2180] Nitrate reductase delta subunit |
TIGRFAM ID | [TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.368181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CTTCGCTGTA CCACCTGCTC TCCACCCTGC TCGCCTACCC CGAGCCGGAG CTGCTGGACG CCCTGCCCGA GATCGACCGC CTGCTCAGCG CCACCCCCGA TGCACACCGG CGGCTGGCGC CGCTGCTCGA CACGCTGCGC GGCACCGATC TCATCACCTT GCAGGAACAC TACGTTGCCA CCTTCGACCG TAACCCGTCG CATGCGCTGC ATCTGTTCGA GCACGTGCAC GGCGAGAGCC GCGACCGCGG CCAGGCCATG GTCGACCTGA TCGAGGAGTA CCGCAAATAC GGCGTCGAGC CCGCTGCCAA CGAGCTGCCG GACTACGTGC CGCTGTTCCT GGAAGTGCTC GGCCACATGG ACGCGACCGG GCACGGCGAG CAAGCCACGG CCTTGCTGGG CGACGCCATC CACGTGCTGG CCGCCGTCGG CGAGCGCCTG GCGCGCGACG GCACATCCTA CGCCGCCGTC TTCGATGTCC TGCTCACGCG CAGCGACGTG CAGCCCCAGC CGCTGACCGA GCCGCCCATC CGCGACATGG ACGAGGCCAT GGAGCACTTC GGCCCCGGCG CGGACGGCGT CGAGCCGCTG CTGCGCCCCG CGCCGGCGGC GGAGCAGCCC GTGCAGTTCC ACCCGCGCAA GGGCGCGGCT GCGCACCCCA CCCCTCTGTG A
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Protein sequence | MTQPSLYHLL STLLAYPEPE LLDALPEIDR LLSATPDAHR RLAPLLDTLR GTDLITLQEH YVATFDRNPS HALHLFEHVH GESRDRGQAM VDLIEEYRKY GVEPAANELP DYVPLFLEVL GHMDATGHGE QATALLGDAI HVLAAVGERL ARDGTSYAAV FDVLLTRSDV QPQPLTEPPI RDMDEAMEHF GPGADGVEPL LRPAPAAEQP VQFHPRKGAA AHPTPL
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