Gene RSp0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0974 
SymbolnarG 
ID1223286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1226527 
End bp1230264 
Gene Length3738 bp 
Protein Length1245 aa 
Translation table11 
GC content67% 
IMG OID637240839 
Productrespiratory nitrate reductase alpha chain oxidoreductase protein 
Protein accessionNP_522535 
Protein GI17549195 
COG category[C] Energy production and conversion 
COG ID[COG5013] Nitrate reductase alpha subunit 
TIGRFAM ID[TIGR01580] respiratory nitrate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.35672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACT TTCTCGATCG CCTGAAGTTC CTCACCCATG TCCGGTCGAC CTTTGCCGAC 
GGCCATGGCG CCGTCGTCAA CGAAGACCGC CGCTGGGAAG ACGGTTACCG CAGCCGCTGG
CAGCACGACA AGATCGTGCG CTCCACCCAC GGCGTGAACT GCACGGGTTC CTGCTCGTGG
AAGGTCTACG TCAAGAACGG CCTGATCACG TGGGAAACCC AGCAGACCGA CTACCCGCGC
ACCCGCCCCG ACCTGCCCAA CCACGAGCCG CGCGGCTGCC CGCGCGGCGC GTCGTACAGC
TGGTATGTCT ACTCCGCCCA GCGCGTGAAG ACGCCGCTGA TCCGCGGCCG CCTGATGCAG
ATGTGGCGCG AGGCCCGCAA GACCATGGAC CCGGTCGCCG CCTGGGAATC CATCAGCCAG
AACCCGGAGA AGGCCAAGCG CTACAAGAGC GTGCGCGGCC AGGGCGGCTT CGTGCGCGCC
GACTGGGACA CCGCCACCGA GATCATCGCC GCGGCCAACG CCTACACCAT CAAGCGCTAC
GGCCCCGACC GCGTGGTCGG CTTCTCGCCC ATCCCGGCCA TGTCGATGGT CAGCTACGCG
GCTGGCGCGC GCTACCTGAG CCTGATCGGC GGGGTGTGCC TGTCGTTCTA TGACTGGTAC
TGCGACCTGC CGCCCGCCAG TCCGCAAGTG TGGGGCGAGC AGACCGACGT GCCGGAATCG
GCCGACTGGT ACAACTCCAC CTACCTGATG GTGTGGGGCT CCAACGTGCC GCAGACCCGC
ACGCCGGACG CGCACTTCTA CACCGAAGTC CGCTACAAGG GCACCAAGAC CGTGGCGATC
TCGTCCGACT ACGGCGAGAT GGTCAAGTTC GGCGACATCT GGCTCGCCCC CAAGCAGGGC
ACCGACGCCG CGCTGGCCAT GGCGATGGGC CACGTGGTGC TCAAGGAATT CCACGCGACG
GGCAAGTCCG CCTACTTCCG CGACTACGTC AAGCAGTACA CCGACATGCC GATGCTGGTC
CTGCTGCGCG AGGCTGAAAA CGGCAGCTAC ACCAGCGACC ACTTCCTGCG TGCCTCGCAC
CTGGCCGGCA ACCACGGCGA GGCCAACAAC CCCGATTGGA AGACGCTGCT GATCGACGCG
CCGACCGGCC GGCTGGTCGT GCCCAACGGC ACCATCGGCC TGCGCTGGAA CGAAGCGCAG
CACGACGGCG GCGCCAAGGT CGGGCGCTGG AACCTCGAAC TGAAGGACGC CGCCGACGGC
GCGGCGATCG ACCCGCTGCT GTCGCTGACC GGTGCGCACG ACGAGGTGGT GGACGTCGGC
TTCCCGTACT TCGGCGGCGA GCACGATGCG CGGCTCCTGC GCCGCGTGCC GGTCAAGCGC
GTGACGCTGG CCGACGGCAG CACCGCGCGC ATCGCCACCG TCTACGACCT CCAACTGGCC
AACTACGGCG TCGACCAGGG CCTGGGCGGC CCCAACGTCG CCGCCGGCTT TGACGACGAC
GTGCCCTACA CCCCGGCCTG GCAGGAAAAG CACACCGGCG TGCCGCGCCA GCAGGTGATC
CAGGTGGCGC GCGAGTTTGC CGACAACGCC GACCGCACGC GCGGCAAGAG CATGGTCATC
GTCGGCGCCG CGCTGAACCA CTGGTACCAC AACGACATGA TCTACCGCGG CATCATCAAC
CTGCTGATGA TGTGCGGCTG CATCGGCCAG AGCGGCGGCG GCTGGGCGCA CTACGTGGGG
CAGGAGAAGC TGCGCCCGCA GTTCGGCTGG GCACCGCTGG CCTTCGGGCT GGACTGGTCG
CGCCCGCCGC GCCAGATGAA CGGCACCTCG TTCTTCTACA GCCACACCAG CCAGTGGCGG
CACGAGAAGC TCTCGGTGGA CGAGATCCTC AGCCCCACGG CCGACCGCAC GCGCTACGAC
GGCCTGTCGC TGCTGGACCT GAACGCCCGC AGCGAGCGCA TGGGCTGGCT GCCTTCCGCG
CCGCAGCTCA ACGCCAACCC GCTCGACGTG ACCGATGCCG CGCAGGCGGC CGGCCAGGAG
CCGGTGGCCT ACACCGTCGA GCAGCTCAAG GCCGGCAAGC TGCGCTTCGC CTGCGAAGAC
CCGGACCACC CGGACAACTT CCCGCGCAAC ATGTTCGTCT GGCGCTCGAA CATCCTGGGC
AGCTCGGGCA AGGGCCACGA GTATTTCCTG AAGTACCTGC TCGGCACGCA GAACGCGCTG
TTCAGCGATG AGTCCGCCGC CATCAAGCCG GCCGAAGTGG AAGTGCGCGA AGCGGCCGAA
GGCAAGCTCG ACCTGCTGAC GGTGCTGGAC TTCCGCATGA GCACGACCTG CCTGTACGGC
GACATCGTGC TGCCCACCGC CACCTGGTAC GAGAAGGACG ACCTCAACAC GTCCGACATG
CACCCGTTCA TCCACCCGCT GTCGGAGGCG GTGCAGCCGC TGTGGGAGTC CAAGACCGAC
TGGGAGATCT ACAAGACCAT CGCCAAGAAG TTCACGGAAA TCGCCGGGCC ACTGCTGGGC
ACGCGCCGCG ACCTGGTCTG CACGCCGCTC ATGCATGACA CCCCGGGCGA ACTCGGCCAG
CCGTTTGCCC CCCGTGACTG GAAGCACGGC GAGTGCGACC TGATCCCGGG CAAGACCGCG
CCGGCCATGA CGGTGGTCGA GCGCAACTAT GCCGACATCT ATCGCAAGTT CACCTCGGTC
GGGCCGCTGC TGGACAAGCT CGGCAACGGC GGCAAGGGCA TCAACTGGGA TACGGAGCAC
GAGGTGCACG AGCTCGCCGG CCTGACGCAC AAGGTGACCA CGCCCGGCGT CAGCCAGGGC
CGCCCGCGCC TGGAGACGGC CACCGACGCG GCCGAGATGA TCCTGACCTT CGCGCCCGAG
ACCAACGGCC ACGTGGCGGT CAAGGCATGG GACGCGCTGT CGAAGATCAC CGGCCGCGAC
CACACGCATC TGGCCGTCGG CCGCGAGCAC GACAAGATCC GCTTCCGCGA CGTGCAGGCG
CAGCCGCGCA AGATCATCTC CGCGCCGACG TGGTCGGGGC TGGAGTCCGA AGAGGTCAGC
TACAACGCCG GCTACACCAA TGTGCACGAG CTCATTCCAT GGCGCACGCT CACCGGCCGC
CAGCAGTTCT ACCAGGACCA CCGCTGGATG CTCGACTTCG GCGAGGGCGT GTGCCTGTAC
AAGCCGCCCA TCGACACCAA GACCGTGCAG CCGATGCTGG GCAAGCATAG CAACGGCAAC
CCGGAGCTGG TGCTGAACTG GATCACGCCG CACCAGAAGT GGGGCATCCA CTCGACCTAC
TCCGACAACC TGCGCATGCT CACGCTCTCG CGCGGCGGGC CGCACGTCTG GGTGTCCGAA
CCCGAGGCGA AAGCCGCGGG CCTGCGCGAC AACGACTGGG TGGAGGTCTT CAACGTCAAC
GGCACGCTCA CGGCGCGACT GGTGGTCAGC CAGCGCGTAC CGCGCGGCAT GTGCCTGATG
TACCACGCGC AAGAGAAGAT CGTGAACGTG CCGGGCGCCG AGACCAGCGG CATGCGCGGC
GGTATCCACA ACTCCGTCAC CCGCACCGTC ACCAAGCCCA CGCACATGAT CGGCGGCTAT
GCGCAGCTGG CCTACGGCTT CAACTACTAC GGCACCGTAG GCAGCAACCG CGACGAATTC
GTGATCGTGC GCAAGATGCA GCGCATCGAT TGGATGGAAG AACAACTGGC CGAAACACTC
CCGGGAGCCT CGCAATGA
 
Protein sequence
MSHFLDRLKF LTHVRSTFAD GHGAVVNEDR RWEDGYRSRW QHDKIVRSTH GVNCTGSCSW 
KVYVKNGLIT WETQQTDYPR TRPDLPNHEP RGCPRGASYS WYVYSAQRVK TPLIRGRLMQ
MWREARKTMD PVAAWESISQ NPEKAKRYKS VRGQGGFVRA DWDTATEIIA AANAYTIKRY
GPDRVVGFSP IPAMSMVSYA AGARYLSLIG GVCLSFYDWY CDLPPASPQV WGEQTDVPES
ADWYNSTYLM VWGSNVPQTR TPDAHFYTEV RYKGTKTVAI SSDYGEMVKF GDIWLAPKQG
TDAALAMAMG HVVLKEFHAT GKSAYFRDYV KQYTDMPMLV LLREAENGSY TSDHFLRASH
LAGNHGEANN PDWKTLLIDA PTGRLVVPNG TIGLRWNEAQ HDGGAKVGRW NLELKDAADG
AAIDPLLSLT GAHDEVVDVG FPYFGGEHDA RLLRRVPVKR VTLADGSTAR IATVYDLQLA
NYGVDQGLGG PNVAAGFDDD VPYTPAWQEK HTGVPRQQVI QVAREFADNA DRTRGKSMVI
VGAALNHWYH NDMIYRGIIN LLMMCGCIGQ SGGGWAHYVG QEKLRPQFGW APLAFGLDWS
RPPRQMNGTS FFYSHTSQWR HEKLSVDEIL SPTADRTRYD GLSLLDLNAR SERMGWLPSA
PQLNANPLDV TDAAQAAGQE PVAYTVEQLK AGKLRFACED PDHPDNFPRN MFVWRSNILG
SSGKGHEYFL KYLLGTQNAL FSDESAAIKP AEVEVREAAE GKLDLLTVLD FRMSTTCLYG
DIVLPTATWY EKDDLNTSDM HPFIHPLSEA VQPLWESKTD WEIYKTIAKK FTEIAGPLLG
TRRDLVCTPL MHDTPGELGQ PFAPRDWKHG ECDLIPGKTA PAMTVVERNY ADIYRKFTSV
GPLLDKLGNG GKGINWDTEH EVHELAGLTH KVTTPGVSQG RPRLETATDA AEMILTFAPE
TNGHVAVKAW DALSKITGRD HTHLAVGREH DKIRFRDVQA QPRKIISAPT WSGLESEEVS
YNAGYTNVHE LIPWRTLTGR QQFYQDHRWM LDFGEGVCLY KPPIDTKTVQ PMLGKHSNGN
PELVLNWITP HQKWGIHSTY SDNLRMLTLS RGGPHVWVSE PEAKAAGLRD NDWVEVFNVN
GTLTARLVVS QRVPRGMCLM YHAQEKIVNV PGAETSGMRG GIHNSVTRTV TKPTHMIGGY
AQLAYGFNYY GTVGSNRDEF VIVRKMQRID WMEEQLAETL PGASQ