| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0890 |
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| Symbol | hpaE |
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| ID | 1223197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1127111 |
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| End bp | 1128577 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240750 |
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| Product | putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase protein |
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| Protein accession | NP_522451 |
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| Protein GI | 17549111 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03216] 2-hydroxymuconic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.432233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA ACTTCATCAA CGGCGCCTAT CGCGAAGGCC GCGCGGGCAA GCGCTTCCGC
GATCTCGACC CGTGTACGGG CCGCCTCGTC GCGGAGGTCA GCGAGGCCGG CAAGGAAGAC
GTCGACGACG CCGTGCAAGC CGCCCGCGCC GCGCTCAACG GCCCGTGGGG CAAGCTCACG
CTGGCGCAGC GCTGCGATCT GCTCTATGCC GTGGCCGATG AGATCGATCG GCGCAAGGAA
GACTTTCTCG CGGCGGAGGT GGCCGATACC GGCAAGCCCC GCGCCTTGGC TTCGCACCTG
GATATCCCGC GCGGCGCGGC GAACTTCCGC GTCTTCGCCG ATGCCGTCCG CAATGTTGCC
ACGGAGTGCT TCACAGGCAC CGCGCCCGAC GGCAAGCCGT CGCTGAACTA CGCGCTGCGC
CGCCCCAAGG GCGTGATCGC GGTGGTCTGC CCGTGGAACC TGCCGCTGCT GCTGATGACG
TGGAAGGTCG GTCCCGCGCT CGCCTGCGGC AATACCGTCG TGGTCAAGCC TTCCGAGGAG
ACGCCCGCCA CGGCGGCGCT GCTCGGCGAG GTGATGAACG CCGTGGGGGT GCCGGCGGGT
GTCTACAACG TCGTGCACGG CTTTGGTCCG GATTCGGCAG GCGAATTCCT GACGCGCCAT
CCCGACGTGG ACGCCATCAC CTTCACGGGC GAGACGCGCA CCGGCGCGGC CATCATCAAG
GCCAGCGCGG ACGGCATCAA GCCGGTCTCG ATGGAGCTCG GCGGCAAGAA CCCCGCCCTG
GTGTTCGCCG ACGCCGACCT GGATGCGGTG ATCGCCGGCC TGAAGCGCTC GGTGTTCGAA
AACACGGGGC AGGTGTGCCT CGGCACCGAG CGCGTGTACG TCGAGCGGCC CATGTTCGAC
AAGGTGGTGC GGGCACTGGC CGAGATCGCG GGCACGCTGC GGCCGGGCCT GCCGGGCGAT
CCGCATGCCA ACTTCGGCCC GCTCATCTCG GGCGAACACC AGCGCAAGGT GCTGGGCTAC
TACGCGCTCG CGCGCGATGA GGGGGCGACA GTCCACTACG GCGGGGGCGT GCCCGACATG
CCGCCCGACC TGCGCGAAGG CGCATGGATC GAGCCCACGG TCTGGACCGG CCTGCCGCGC
GACTCGCGGG TGCTGACCGA AGAGATTTTC GGCCCCTGCT GCCACGTCGA GCCCTTCGAT
AGCGAGGAGG AGGCGGTTCG CCTGGCCAAC GGGACGCCCT ATGGGCTAGC GACATCGCTC
TATACCGGCG ACGTCAACCG CGCCCATCGC GTGAGCGCGA AGCTCAAGGT CGGCGTCGTG
TGGGTCAACA CGTGGTTCCT GCGCGACCTG CGCACCGCGT TCGGCGGGTC CGGCAAATCG
GGCATCGGAC GCGAAGGGGG CGTGCATTCG CTGGAGTTCT ACACGGAGCT GTCCAACGTG
TGCCTGAAGC TGGAGCCGCA AGCATGA
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| Protein sequence | MIQNFINGAY REGRAGKRFR DLDPCTGRLV AEVSEAGKED VDDAVQAARA ALNGPWGKLT
LAQRCDLLYA VADEIDRRKE DFLAAEVADT GKPRALASHL DIPRGAANFR VFADAVRNVA
TECFTGTAPD GKPSLNYALR RPKGVIAVVC PWNLPLLLMT WKVGPALACG NTVVVKPSEE
TPATAALLGE VMNAVGVPAG VYNVVHGFGP DSAGEFLTRH PDVDAITFTG ETRTGAAIIK
ASADGIKPVS MELGGKNPAL VFADADLDAV IAGLKRSVFE NTGQVCLGTE RVYVERPMFD
KVVRALAEIA GTLRPGLPGD PHANFGPLIS GEHQRKVLGY YALARDEGAT VHYGGGVPDM
PPDLREGAWI EPTVWTGLPR DSRVLTEEIF GPCCHVEPFD SEEEAVRLAN GTPYGLATSL
YTGDVNRAHR VSAKLKVGVV WVNTWFLRDL RTAFGGSGKS GIGREGGVHS LEFYTELSNV
CLKLEPQA
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