| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0867 |
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| Symbol | hrcJ |
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| ID | 1223174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1093976 |
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| End bp | 1094785 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240727 |
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| Product | Hrp conserved lipoprotein HRCJ transmembrane |
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| Protein accession | NP_522428 |
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| Protein GI | 17549088 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.40629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0038632 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACGC CCCGTTCCTT GCGCTTGCGC CGTGGCGCGC TGGTTGTCGC GCTCGCGCTG
ACCACGCTGC TGGCCGGCTG CAACAAGCAG CTCTTCGCCC AGCTGACCGA AGCCGATGCC
AACGACATGC TGACCGTGCT GCTGCAGGCC GGCATCGACG CGCAGAAGAC CTCGCCCGAC
GACGGCAAGA CCTGGTCCGT GCTGGTCGAC GACGACGCCT TCGCGCGCTC GATGGAGGTG
CTGCACGCCC ACGGCCTGCC GCGCGAGAAA TACGCCAACC TCGGCGACAT CTTCAAGAAG
GACGGCCTGA TCTCCACGCC GACCGAGGAA CGGGTGCGCT TCATCTACGG GGTGTCGCAG
CAGCTGTCGC AGACGCTGTC GCGCATCGAT GGCGTGGCGG TCGCCAGCGT GCAGATCGTG
CTGCCCAACA ACGATCCGCT GGCCAGCGTG GTCAAGCCGT CCAGCGCTTC GGTGTTCATC
AAGTACCGGC CGACGGCCAA CGTGACCGCG CTGCTGCCGA GCATCAAGAA CCTGGTGGTG
CACAGCGTGG AAGGGCTGAC GTATGAGAAC GTCGCCGTGA CGCTGGTGCC CGGGACGGCG
GACGACCCCG CCATCGTGGC CGCCACCGCG CGGCGCGCGC CGCGCGGCGT GTCGTGGGTG
ATGCTGGGCA GCCTGGCCGG CGTGCTGGTC GGCCTGGTGG CGCTGTGGAG CGCGGTGACG
CGCATGCCGG CCGTGCGCAC GCGCCTGGAT GCGCTGCGCG AGCGGATCGC CAGCCGCATG
CCGGCCCGCC TGAAGAAGCG CGAGGCATGA
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| Protein sequence | MMTPRSLRLR RGALVVALAL TTLLAGCNKQ LFAQLTEADA NDMLTVLLQA GIDAQKTSPD
DGKTWSVLVD DDAFARSMEV LHAHGLPREK YANLGDIFKK DGLISTPTEE RVRFIYGVSQ
QLSQTLSRID GVAVASVQIV LPNNDPLASV VKPSSASVFI KYRPTANVTA LLPSIKNLVV
HSVEGLTYEN VAVTLVPGTA DDPAIVAATA RRAPRGVSWV MLGSLAGVLV GLVALWSAVT
RMPAVRTRLD ALRERIASRM PARLKKREA
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