Gene RSp0851 details

Gene Information

• Locus tag: RSp0851
• Symbol: prhJ
• ID: 1223158
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 1081910
• End bp: 1082434
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637240711
• Product: transcription regulator PRHJ transcription regulator protein
• Protein accession: NP_522412
• Protein GI: 17549072
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.353607
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGCCC GGGTTCAGAA CAACGTGCTG CGACAAGCAG CCGAAAACCA GTATCTCCAT 
ACGCTGTCCG ACACATCGCC CCGCTGGCGC CCCCAGGCCG GCACGGCAGC GACCTCCGTC 
CTGTGGGGCG CCCTGACCGC ATCGACCGGC GTGATCCTGG TCGATCTGGA GCAGTTGGCC 
GAGGCGGTGG GTGAGTTGCC CTCGGGGCAG CTGCAGCCGC TGACGCTCGA GCAGACCTAC 
GCCATGCTGG GCCGTATCCT CGATGCCAGG CGGCACGGTC CCGAGCCCAG GCCCGATGGC 
GGCGCGCGCC TGTCCGCCTT GACGCCGCGC CAGCACGACA TCCTGCGCGA GGCGGCACAT 
GGCAAATCCA ATGTGGAGAT CGCGCAGACA CTGCATATCA GCGTTGAAAC CGTCAAATCG 
CACGTGCGTC AGATCCTGAT GCGCCTTGAC GCACGCAATC GGACGGAATT GGCGGCGATA 
TATCAACAAA GTGTGACTGA AGTGCGTATA CGCGGAATCA ATTAA 

 

Protein sequence

MNARVQNNVL RQAAENQYLH TLSDTSPRWR PQAGTAATSV LWGALTASTG VILVDLEQLA 
EAVGELPSGQ LQPLTLEQTY AMLGRILDAR RHGPEPRPDG GARLSALTPR QHDILREAAH 
GKSNVEIAQT LHISVETVKS HVRQILMRLD ARNRTELAAI YQQSVTEVRI RGIN