| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0830 |
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| Symbol | garD |
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| ID | 1223137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1048691 |
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| End bp | 1050292 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240690 |
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| Product | D-galactarate dehydratase |
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| Protein accession | NP_522391 |
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| Protein GI | 17549051 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.107434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT CCACGCTGGC CCCCGAGGCC GGCACCGAAA CCGAGAAAGC GCTGACCATC
CGCGTGCACG ACAGCGACAA CGTCGCCATC GTCGTCAACG CGCGCGGCCT GCCCGCGGGC
ACCGCGCTGG CCGATGGCAC CGTGCTGGCC GAGGGCGTGC CGCAGGGCCA CAAGGTGGCG
CTGGCCGACC TGGCCGAAGG CGACGCGGTG GTCCGCTACG GCGAGGTGAT CGGCTACGCC
GTCAAGGCGC TGCCGCGCGG CAGCTGGGTC AATGAGCACG CGGTGCGCCT GCCGTCCGCC
CCGGCGCTGG ACGACCTGCC GCTGGCCACG CGCCCCGATC CCGGGCTGCC GCCGCTGCAG
GGCTACACCT TCGAGGGCTA CCGCAATGCC GACGGCACGG TCGGCACCAA GAACGTGTTG
GGCATCATGA CCAGCGTGCA ATGCGTGGCC GGCGTGACCG ACCACGTGGT GGCCCGCATC
AAGCGCGAGC TGCTGCCGCG CTATCCCAAT GTCGACGACG TGGTCGCGCT CAACCACGCC
TATGGCTGCG GCGTGGCCAT CAACGCCCCG GCGGCCATCG TGCCGATCCG CACGCTGCAG
AACCTGGCGC TCAACCCGAA CTTCGGCGGC GAGGTGATGG TGATCGGCCT GGGCTGCGAG
AAGCTCGTAC CCGAGCGCCT GGTGCCCGAG ACGCTCGCGC CGGGCGGGCG CATTCCCATC
GAGGTGGCGG GCACCGCGGA TTCGCCCGTG CTGCGCCTGC AGGACGAAGC CTTCGACGGC
TTCACCGGCA TGGTCGAGGC CATCCTGGAA ATGGCCGAGC GCCGCCTGGC GCAGCTGAAC
ACGCGCCGGC GCGAGACCTG CCCGGCCTCC GATCTGGTGG TCGGCGTGCA GTGCGGCGGC
AGCGATGCTT TCTCCGGCGT GACCGCCAAC CCGGCGGTGG GCTTTGCCGC CGACCTGATC
GTGCGCGCCG GCGGCACGGT GATGTTCTCG GAGGTGACCG AGGTGCGCGA CGCCATCCAC
CTGCTGACGC CGCGCGCCAT CGATGCGGAC ATCGGCCGCG CGCTGCTGCG CGAGATGGCC
TGGTACGACA GCTACCTGAG CGGCGGCCAG ACCGACCGCA GCGCCAATCC GTCGCCCGGC
AACAAGAAGG GCGGGCTGTC CAACGTGGTG GAGAAGGCGC TGGGCTCCAT CGTCAAGTCG
GGCAGCAGCC CCATCGTCGA TGTGCTCGGC CCGGGCGAGA AGGTGCGCCG CAAGGGCCTG
ATCTTCGCGG CCACGCCCGC CAGCGATTTC GTCTGCGGCA CGCTGCAGCT CGCCTCCGGC
ATGAACCTGC AGGTGTTCAC CACCGGGCGC GGCACGCCGT ACGGCCTGTC GATGGCGCCG
GTGATCAAGG TGTCGACGCG CAAGGCGCTG TCCGAGCGCT GGCACGACCT GATCGACCTC
GACGCCGGCC GCATCGCCAC CGGCGAGGCC TCCATTGCCG ACATCGGCTG GGAGCTGTTC
CGCCTGATCC TGGATGTGGC CAGCGGCCGC AAGCAGGTGT GCGCCGACAG GCTCGGCCTG
CACAACGCGC TGACCCTGTT CAACCCCGCA CCGGTGACCT GA
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| Protein sequence | MSESTLAPEA GTETEKALTI RVHDSDNVAI VVNARGLPAG TALADGTVLA EGVPQGHKVA
LADLAEGDAV VRYGEVIGYA VKALPRGSWV NEHAVRLPSA PALDDLPLAT RPDPGLPPLQ
GYTFEGYRNA DGTVGTKNVL GIMTSVQCVA GVTDHVVARI KRELLPRYPN VDDVVALNHA
YGCGVAINAP AAIVPIRTLQ NLALNPNFGG EVMVIGLGCE KLVPERLVPE TLAPGGRIPI
EVAGTADSPV LRLQDEAFDG FTGMVEAILE MAERRLAQLN TRRRETCPAS DLVVGVQCGG
SDAFSGVTAN PAVGFAADLI VRAGGTVMFS EVTEVRDAIH LLTPRAIDAD IGRALLREMA
WYDSYLSGGQ TDRSANPSPG NKKGGLSNVV EKALGSIVKS GSSPIVDVLG PGEKVRRKGL
IFAATPASDF VCGTLQLASG MNLQVFTTGR GTPYGLSMAP VIKVSTRKAL SERWHDLIDL
DAGRIATGEA SIADIGWELF RLILDVASGR KQVCADRLGL HNALTLFNPA PVT
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