| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0828 |
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| Symbol | gudP |
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| ID | 1223135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1045932 |
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| End bp | 1047284 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240688 |
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| Product | putative glucarate transporter (D-glucarate permease) transmembrane protein |
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| Protein accession | NP_522389 |
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| Protein GI | 17549049 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.667348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.455207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA AGGCACCCAC CGTGGGCGCG CAGAGCGTGC CGCGCACCGA ACGCACCAGC
CGCGTGCGCT TCATGATCCT CGCGATGCTG TTCATCGTGA CGACCATCAA CTATGCCGAC
CGCGCCACCA TTTCCATGGC CGGCTCGGCC ATGCAGAAAG ACCTCGGCAT CGATGCCGTG
TCGCTCGGCT ACATCTTCTC GGCCTTCGGC TGGGCGTACG TGATCGCGCA GATCCCGGGC
GGCTGGCTGC TCGACCGCTT CGGCTCCAGG CGCGTGTACT CCTTCAGCAT CCTGCTGTGG
TCGCTGTTCA CGCTGATGCA GGGCACGATC GGCTTCTTCA CCGGCATGGC GGCCATCGTG
CTGGTGTTCT TCCTGCGCTT CATGGTGGGC GTGGCGGAGG CGCCGTCCTT CCCGGCCAAC
AGCCGCATCG TCGCGGCGTG GTTCCCGGCC AATGAGCGGG GCACCGCATC GGCCATTTTC
AACTCGGCGC AGTATGCCGC CACCGTGATC TTCGCGCCGC TGATGGCGTG GCTGGTGCAC
GCCTTCGGCT GGCACTACGT GTTCATCGTG ATGGGCGTGA TCGGCATCGT CATGGCGCTC
GCGTGGAAGC GCTTCATGCA CGATCCGAAG GACCACCCAC GCATCACCCG CGCCGAGATC
GAATACATCG AGGCGGGCGG CGGCCTGGTC AACATGGACC GCGCCGGCGT CGCCAAGACC
GAAGGCCCGG ACATGGGCTA CATCAAGCAG TTGCTGCGCA ACCGCATGCT GATGGGCGTG
TACATCGCCC AGTACTGCAT CAACGCGCTC ACGTATTTCT TCATCACGTG GTTCCCGGTG
TACCTGGTGC AGGCGCGCGG CATGTCGATC CTCAAGGCCG GGTTTGTCGC CTCGATTCCG
GCCGTGTGCG GCTTTCTCGG CGGCATCCTG GGCGGCCTCG TCTCGGATGC GCTGCTGCGC
CGCGGCGCCT CGCTGTCGGT GGCGCGCAAG GTGCCGATCG TGCTGGGCAT GCTGCTGTCG
ATGAGCATGG TGATCTGCAA CTACGTGGAT GCGCAGGGCA TCGTGGTGGC GCTGATGGCG
CTGTCGTTCT TCGGCAAGGG CCTGGGGGCG CTGGGCTGGG CGGTCAACTC GGATACCGCG
CCCAAGCAGA TCGCCGGCCT GTCGGGCGCG CTGATGAACA CCTTCGGCAA CCTGTCGAGC
ATCACCACGC CCATCGCCAT CGGCTACATC GTCAACACCA CCGGATCGTT CAACGGGGCG
CTGGTCTACG TGGGCATCCA TGCGCTGGTG GCCTGCCTGT GCTATCTGGT GATGGTGGGC
GAGATCAAGC GCGTGGAACT GAAGCCGCTG TAA
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| Protein sequence | MEIKAPTVGA QSVPRTERTS RVRFMILAML FIVTTINYAD RATISMAGSA MQKDLGIDAV
SLGYIFSAFG WAYVIAQIPG GWLLDRFGSR RVYSFSILLW SLFTLMQGTI GFFTGMAAIV
LVFFLRFMVG VAEAPSFPAN SRIVAAWFPA NERGTASAIF NSAQYAATVI FAPLMAWLVH
AFGWHYVFIV MGVIGIVMAL AWKRFMHDPK DHPRITRAEI EYIEAGGGLV NMDRAGVAKT
EGPDMGYIKQ LLRNRMLMGV YIAQYCINAL TYFFITWFPV YLVQARGMSI LKAGFVASIP
AVCGFLGGIL GGLVSDALLR RGASLSVARK VPIVLGMLLS MSMVICNYVD AQGIVVALMA
LSFFGKGLGA LGWAVNSDTA PKQIAGLSGA LMNTFGNLSS ITTPIAIGYI VNTTGSFNGA
LVYVGIHALV ACLCYLVMVG EIKRVELKPL
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