Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0677 |
Symbol | metR |
ID | 1222984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 863309 |
End bp | 864223 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240537 |
Product | putative transcriptional activator METR transcription regulator protein |
Protein accession | NP_522238 |
Protein GI | 17548898 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0439978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.107972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAA TCCGCCATCT CCGGACCCTG ATCGCCCTGG CCGAAAGCGG CTCCGTCTCG CGCGCGGCCG AGCGGCTGCA CCTGACCCAG TCGGCGCTGT CGCACCAGCT GCGTGCGCTG GAGTCGCACT ACGGGCTGGC CGTCGTGCGC CGCAAGGGCC AGACCGTGGC GCTGAGCGAG GCAGGCGAGC GCCTGCTGGA GCTGGCGCAC AAGGTGGTCG CCGATATCCA GACCGCCGAG CGCGACCTCG AACGCATCAA GGGCCGCGCC GCCGGCACGC TGCGCATCGC GCTGGAATGC CATACCTGCT TCGACTGGCT GATGCCCGTG ATGGACGCCT TCCGCCAGCG CTGGCCCGAG GTCGAGCTGG ATCTCGTCTC CGGCTTCCAC GCCGATCCGC TCGCGCTGCT CAAGGAGGGC CGCGCCGACG TGGTGATCGG CTCCGAGCGC AAGCCGCGCC AGGGCGTGGT GTTCGCGCCG CTGTTCCGCT TCGAGATCCT CGCGGTGCTG CCGGTCGACC ACCCGCTGCG CAGTCGCAAG TGGCTGGAGG CGAAGGACTT TGCCGACCAG ACCCTCATCA CCTACCCGGT GCCGGAAGAG CGCATCGACC TGATCCGCCA GGTGCTGGCG CCGGCCGGCA TCGCGTTCAC GCGCCGCACC ACCGAGCTGA CCATTGCCGT GCTCCAACTG GTGGCCAGCC GGCGCGGTCT GGCCGCACTG CCGAGCTGGG GCCTGCGCAG CTACGTCGAT TACGAATACG TGGTCACCAA GCGCGTCGGC CGCGAGGGCG TCTGGAGCGA TCTTTACGCT GCCATGGCGC GCGACTATGC GCAGGCGCCG TTCGCGCAGG ATTTCATCGA GACCGCCAAG TCGATCTGCT TTGCGCGGCT GCCGGGACTG ATGGCGCTGG AGTAG
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Protein sequence | MLEIRHLRTL IALAESGSVS RAAERLHLTQ SALSHQLRAL ESHYGLAVVR RKGQTVALSE AGERLLELAH KVVADIQTAE RDLERIKGRA AGTLRIALEC HTCFDWLMPV MDAFRQRWPE VELDLVSGFH ADPLALLKEG RADVVIGSER KPRQGVVFAP LFRFEILAVL PVDHPLRSRK WLEAKDFADQ TLITYPVPEE RIDLIRQVLA PAGIAFTRRT TELTIAVLQL VASRRGLAAL PSWGLRSYVD YEYVVTKRVG REGVWSDLYA AMARDYAQAP FAQDFIETAK SICFARLPGL MALE
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