Gene RSp0656 details

Gene Information

• Locus tag: RSp0656
• Symbol: copA
• ID: 1222963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 834396
• End bp: 836213
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637240516
• Product: copper resistance transmembrane protein
• Protein accession: NP_522217
• Protein GI: 17548877
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2132] Putative multicopper oxidases
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01480] copper-resistance protein, CopA family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCATGA ATCATGCACC CGGCCTGCTG CTGCCGAACC TGCCCCGGCG GCGGTTCGTG 
CAAGGGCTGG CCGCCGGCGG GGTGATCGCC GGGCTGGGGC TGGGCGGCAT CGCCCCATCG 
GCCGCCGCGG CCGGCGCCAC CGCGCTCGGC ACGGCCCCGG TGCTGCGGGG GACCGAATTC 
GACCTCGTGA TCGACGAGAC CCCGGTCAAC TTCACCGGCA AGCCGGCCAT GGCCACCACC 
GTCAACGGCA TGCTGCCCGG GCCCACGCTG CGCTGGCGCG AGGGCGACAC GGTCACCCTG 
CGCGTCACCA ACCGCCTGCG CGAGCCCACC TCGATCCACT GGCACGGCAT CCTGCTGCCG 
TTCCAGATGG ACGGCGTGCC GGGCCTCAGC TTCCACGGCA TCGCCCCCGG CGAGACCTTC 
ACCTACCGCT TCCAGGTCCG GCAGAGCGGC AGCTACTGGT ATCACTCGCA CTCCGGCTTC 
CAGGAGATGA CCGGCGTGTA CGGCGGCCTT ATCATCGACC CGGCCGGCAG CGACCCGATC 
CGCGCCGACC GCGACTACAC CGTGCTGCTC GCCGACTGGA CCGACGAGGA CCCGATGCGG 
ATCCTCGCCA AGCTCAAGAC CCAGAGCGAC TACTACAACT ACCACCAGCC CACGGTGGCG 
GATTTCTTCC GCGATGTCGC CAGCGACGGC TGGCAGGCCG CGCTCGCCAA GCGCCGCATG 
TGGAACCAGA TGCGGATGAG CCCGACCGAC CTGGCCGACC TGTCCGGCGC CACGCTGACC 
CACCTCGCCA ACGGCATCAC GCCGGCGGGC AACTGGACCG GCCTGTTCGC GCCGGGGGAG 
ACCGTGCGGC TGCGCTTCAT CAACGGCGCC GGCAGCACGT TCTATGACGT CCGCATTCCC 
GGGCTCAAGC TCAAGGTGGT GCAGGTCGAC GGGCAGGACA TCGAGCCGGT CACGGTCGAT 
GAGTTCCGCT TCGGCCCGGG CGAGACCTGC GACGTGCTGG TCTCGCCCAA GGACGACGCC 
CATACGATCT TCTGCCAGTC GATGGATCGC ACCGGCTACG CGCGCGGCAC GCTGGCCGTG 
CGCCCCGGCA TGCAGGCCCC GGTGCCGGCC CTGGACACGC CCCAGTGGCT CACCATGACC 
GACATGATGG GAGACATGGG CGGTATGGGG GGTATGGACC ACGGCGGCAT GACCATGATG 
GACGCGGGCG ACATCACGCC GATGGCGCCG GCGGACACCG ACGGCATGGC CATGATGGAC 
GGATCCGGCG GCCCGGACGA CCTGCGGGTG CCGAGCCGGA AGGTCCGCCA CGCCCGCACC 
GAATACGGCC CCGGCACCGA CATGCGCGTC GACACGCCGC GCACCAATCT GGACGATCCC 
GGCATCGGTC TGCGCGGCAA CGGGCGGCGC GTCCTGGTGC TGGCGGACCA GCACACCCTC 
GGCGGGCCGC TCGACCGGCG CGGGCCGCAG CGCGAGATCG AGATGCACCT GACCGGCAAC 
ATGGAGCGCT ACACCTGGTC GATCGACGGC GTGGAGTACG GCCGCTCGGC GCCGATCCAC 
TTCCGCCACG GCGAACGGCT GCGCGTGATC CTGCACAACG ACACGATGAT GACGCACCCG 
ATGCACCTGC ACGGCATGTG GAGTGAGCTC GAAGCGCCGG ACGGGCGCTT CCAGGTGCGC 
CGGCACACCG TGCCGGTCCA GCCCGCGCAG CGCATCAGTT TCCTGGTCAC GGCGGACGCC 
CTGGGCCGCT GGGCATGGCA TTGCCACCTG ATGCTGCACA TGGACGCGGG CATGTTCCGC 
GAGGCGGTGG TCGCATGA 

 

Protein sequence

MRMNHAPGLL LPNLPRRRFV QGLAAGGVIA GLGLGGIAPS AAAAGATALG TAPVLRGTEF 
DLVIDETPVN FTGKPAMATT VNGMLPGPTL RWREGDTVTL RVTNRLREPT SIHWHGILLP 
FQMDGVPGLS FHGIAPGETF TYRFQVRQSG SYWYHSHSGF QEMTGVYGGL IIDPAGSDPI 
RADRDYTVLL ADWTDEDPMR ILAKLKTQSD YYNYHQPTVA DFFRDVASDG WQAALAKRRM 
WNQMRMSPTD LADLSGATLT HLANGITPAG NWTGLFAPGE TVRLRFINGA GSTFYDVRIP 
GLKLKVVQVD GQDIEPVTVD EFRFGPGETC DVLVSPKDDA HTIFCQSMDR TGYARGTLAV 
RPGMQAPVPA LDTPQWLTMT DMMGDMGGMG GMDHGGMTMM DAGDITPMAP ADTDGMAMMD 
GSGGPDDLRV PSRKVRHART EYGPGTDMRV DTPRTNLDDP GIGLRGNGRR VLVLADQHTL 
GGPLDRRGPQ REIEMHLTGN MERYTWSIDG VEYGRSAPIH FRHGERLRVI LHNDTMMTHP 
MHLHGMWSEL EAPDGRFQVR RHTVPVQPAQ RISFLVTADA LGRWAWHCHL MLHMDAGMFR 
EAVVA