Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0654 |
Symbol | copS |
ID | 1222961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 832116 |
End bp | 833516 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240514 |
Product | two component sensor histidine kinase transcription regulator protein |
Protein accession | NP_522215 |
Protein GI | 17548875 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.688778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGGC GGCTCTCGCT CACCGCGCGG CTGACCGCCC TCTTCTCGCT GTGCTCGGCG GCGGTGCTGC TGGGGCTCGG CGTGGTCATC GCGCTGGCGA TGGAGCAGCA CTTCGCGGTG GAGGATTTCA CCGCGCTGGG CGAGCACGTC AGCGTGATCG GGAAGATCGT CGAGTCCGGC CCCGCGCCGC AGGCCGAGGC GCGCATCCGC GATGCCCTGC AGCACCGCAC CGGCTTCGTC GCGCGGATCC TGGGCCCGGA CCGGCGCGCG CTGTACGCGA GCGACGGCTT CGACTTCCGG GCCGCGGACG AGGCCCTGGC CCGCGCGCGG CCCGGCAGCG ACCGGCTGGT CTGGGCGCAG GGCGGCCAGC AGTACCGCGC CATGCACACC ACCGTCGCGC TGCGCGACGG CACGGCCGGC CGCCTCGACA TGTTGGTGGC GATGAACACC GACATCCACG CCCACTTCCT GCATACGTTC CGCGGCACCC TGGCCTTCTA TATCGCCCTG GCGGCGCTGG CCAGCGGGGT CTTCGGCTGG TGGGCGGCGC GGCGCGGCCT GGCGCCGCTG CGCACGCTGG CCTCGCGGGC CCGCACGGTG ACCGCCGACA AGCTCGACGA GCGCATGCCG GTGGACACGG TGCCGGCCGA GGTCGCCGAC CTCGCCGTCA CGCTGAACGC CATGCTCGAG CGCCTGCAGC ACGACTTCCG CCGGCTGTCC GATTTCTCGA CCGACATCGC GCACGAGATC CGCACGCCCA TCACCAACCT GCTGACGCAG ACCGAGGTCG TGCTGTCGCA GCCGCGCGAG GGCGCCAAGT ACCGCGACGT CCTGACCTCC AACGCCGAGG AGCTGCAGCG CCTGGCGCGC ATGGTCTCGG ACATGCTCTA CCTGGCCAAG ATGGAGCACA GCCTGACGCT GCCCAGCGCC GAAGACATCC ACCTCGCCGA CGAGCTGCGC GCCCTCTTCG AGTTCTACGA CGCGCTGGCC GAGGACAAGG CGGTGCGGCT AGAACTGCGC GGCGACGGCC GGGTGAGCGG CGACCGGCTG ATGCTGCGGC GGGCGCTGAG CAACCTGCTG TCCAACGCGA TCCGCCATGC GCCGCCGCGC GGCGCCGTGC TGGTCTCGAT CGCCGACACC GGCCACGGCG TGACGGTCTC GGTGGACAAC GACGGCGACG AGATTCCGCC GCAGGTCCTG TCGCGGATCT TCGAGCGCTT CTACCGGGCA GACAAATCGC GCGCGCGGCC CGAATCGGAC AGCACCGGCC TGGGGCTGGC CATCACCAAG GCGATTGTCG TGGCGCATGG GGGCAGCATC GCCGTCTCGC GGGTGGGCGG GCGCACACGG TTTGCGCTCC ATTTCGCGCG GCGGCCGGAG GCGGGCGCCG CCCCGCACTG A
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Protein sequence | MRRRLSLTAR LTALFSLCSA AVLLGLGVVI ALAMEQHFAV EDFTALGEHV SVIGKIVESG PAPQAEARIR DALQHRTGFV ARILGPDRRA LYASDGFDFR AADEALARAR PGSDRLVWAQ GGQQYRAMHT TVALRDGTAG RLDMLVAMNT DIHAHFLHTF RGTLAFYIAL AALASGVFGW WAARRGLAPL RTLASRARTV TADKLDERMP VDTVPAEVAD LAVTLNAMLE RLQHDFRRLS DFSTDIAHEI RTPITNLLTQ TEVVLSQPRE GAKYRDVLTS NAEELQRLAR MVSDMLYLAK MEHSLTLPSA EDIHLADELR ALFEFYDALA EDKAVRLELR GDGRVSGDRL MLRRALSNLL SNAIRHAPPR GAVLVSIADT GHGVTVSVDN DGDEIPPQVL SRIFERFYRA DKSRARPESD STGLGLAITK AIVVAHGGSI AVSRVGGRTR FALHFARRPE AGAAPH
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