| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0650 |
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| Symbol | mmsA |
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| ID | 1222957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 826220 |
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| End bp | 827767 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240510 |
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| Product | methylmalonate-semialdehyde dehydrogenase oxidoreductase protein |
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| Protein accession | NP_522211 |
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| Protein GI | 17548871 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.280918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.338117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TCGCATCCCT CTCCCCGGTC TCAACCGCCG GGCATCCCCG CACGCAGCCG
ACCGTCAAGC TGCTGATCGG GGGCGAGTTC GTCGAATCCC GCTCGGCCGA GTGGCGCGAG
GTGGTGAACC CGGCCACGCA GGAGGTGCTG GCGCGCGTGC CGTTCGCCAC GCGGGATGAG
GTGGATGCGG CCATCCGCTC GGCGCACGCC GCGTTCGCCA CCTGGAAGCA CACCCCGGTG
GGCGCCCGCA TGCGCATCAT GCTCAAGTAC CAGGCGCTGA TCCGCGAGCA CCTGCCGCGC
ATCGCCCGCA CGCTGACGGC CGAGCAGGGC AAGACGCTGC CCGACGCCGA GGGCGACATC
TTCCGCGGGC TCGAGGTGGT CGAGCACGCG TGCTCGGTCG GTTCGCTGCA GCAGGGCGAA
TTCCTGGAGA ACGTGGCCGG CGCGGTCGAC ACCTACACGC TGCGCCAGCC GCTGGGCGTC
TGCGCCGGCA TCACGCCGTT CAACTTCCCG GCGATGATCC CGCTGTGGAT GTTCCCGATG
GCGATCGTCT GCGGCAACAC CTTCGTGCTC AAGCCGTCGG AGCAGGACCC GCTGTCGACC
ATGCTGCTGG TCGAGCTGGC GCTCGAAGCG GGCGTGCCGC CGGGGGTGCT CAACGTCGTG
CATGGCGGCA AGGAAGTGGT GGATGCGCTG TGCACGCATG AACTAGTGAA AGCGGTGTCG
TTCGTCGGCT CGACGGCGGT CGGCACGCAT GTGTACCGGC TCGCCGGCGA GCACGGCAAG
CGCGTGCAGT CGATGATGGG CGCCAAGAAC CACGCGGTGG TGCTGCCCGA CGCCAACCGC
GAGCAGACGC TCAACGCGCT GGTGGGCGCG GCGTTCGGCG CGGCCGGCCA GCGCTGCATG
GCGACCTCGG TGGCGGTGCT GGTGGGCGCG GCGCAGCAAT GGGTGCCCGA ACTGGTGGAG
AAGGCCCGGG CGCTGAAGGT GAACGCGGGC GTCGAGCCCG GCACCGATGT CGGCCCGGTG
GTCTCGCGCG CGGCCCGCCA GCGCATCCTT GACCTGATCG AATCCGGCGT GCGGCAAGGC
GCGACGCTCG CGCTCGACGG CCGCGGCGTT CGCGTCGCGG GCTATGAAGA CGGCAACTTC
ATCGGCCCGA CCGTCTTCAC CGGCGTGAAG ACCGACATGG ACATCTACCG CAACGAGATC
TTCGGGCCGG TGCTGCTGGT GCTGACCGCG CCCACGCTGG ACGAAGCCAT CGCGCTGGTC
AACCGCAATC CGTTCGGCAA CGGCGTGGGC CTGTTCACGC AGAGCGGCGC GGCGGCGCGC
AGGTTCCAGA GCGAGATCGA CGTGGGCCAG GTCGGCATCA ACATCCCGAT CCCGGTGCCG
GTGCCCTACT TCAGCTTCAC CGGCTCGCGC GGCTCGAAGC TGGGCGATCT GGGGCCGTAC
GGCAAGCAGG TCGTGCAGTT CTACACGCAG ACGAAGACGG TCACCGCGCG CTGGTTCGAC
GACGCGATCG AGGCCGGCGG CGTCAACACC ACCATCAGCC TGCGCTGA
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| Protein sequence | MSAVASLSPV STAGHPRTQP TVKLLIGGEF VESRSAEWRE VVNPATQEVL ARVPFATRDE
VDAAIRSAHA AFATWKHTPV GARMRIMLKY QALIREHLPR IARTLTAEQG KTLPDAEGDI
FRGLEVVEHA CSVGSLQQGE FLENVAGAVD TYTLRQPLGV CAGITPFNFP AMIPLWMFPM
AIVCGNTFVL KPSEQDPLST MLLVELALEA GVPPGVLNVV HGGKEVVDAL CTHELVKAVS
FVGSTAVGTH VYRLAGEHGK RVQSMMGAKN HAVVLPDANR EQTLNALVGA AFGAAGQRCM
ATSVAVLVGA AQQWVPELVE KARALKVNAG VEPGTDVGPV VSRAARQRIL DLIESGVRQG
ATLALDGRGV RVAGYEDGNF IGPTVFTGVK TDMDIYRNEI FGPVLLVLTA PTLDEAIALV
NRNPFGNGVG LFTQSGAAAR RFQSEIDVGQ VGINIPIPVP VPYFSFTGSR GSKLGDLGPY
GKQVVQFYTQ TKTVTARWFD DAIEAGGVNT TISLR
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