Gene RSp0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0622 
SymbolcbiD 
ID1222929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp753312 
End bp754463 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID637240482 
Productcobalamin biosynthesis D transmembrane protein 
Protein accessionNP_522183 
Protein GI17548843 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1903] Cobalamin biosynthesis protein CbiD 
TIGRFAM ID[TIGR00312] cobalamin biosynthesis protein CbiD 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.158551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAT CTGCCCGCCG CCCCTTCGAC CTCGCCACGC CCGCGCCCAA CGGCCTGCGG 
CGCGGCCGCA CGACCGGCAC CTGCGCCACC GCCGCGGTCA AGGCGGCGCT GCTCAGGCTG
GTGCGCGGCG AGACGGTCGA TGCGGTAGAG GTCAGCCTGC CGGATCCGGA CTACTGCCTG
GAGGTCCCCA TCGCGCGCAT CGAGCCACTG GCCAGCGGTG CGGTGCGCGC CGACGTGCTC
AAGTACGCCG GGGACGATCC GGACAACACC GACGGCGCCA CGATCTTCGC CGAGGTCTCG
GTCAACCACG CGGGCGAGGT GCGCTTCATG GCGGCGCCGG GCGTGGGCAC CGTCACCCAG
CCGGGCCTGC GTGTGCCGCC CGGCGAGCCG GCCATCAACC CGGTGCCGCG CCAGATGATG
CGCATGGCGG TGGACGAAGT GCTGGCCGGC GGCGCCAACC CCGGCTTCGA CCTGGCGATC
GGCTGCGTGG ACGGCGAGCG CATCGCCCGC CGCACCTTCA ACCCGATGCT GGGCATCGTG
GGCGGCATCT CCATCCTCGG CACCAGCGGC ATTGTCGAGC CGATGTCGCT GGCGGCGTGG
ATGGCGTCGA TCGAGGTGTA CGTGCGCGTG GCGCTGGGCG ATGCGCCCGA GGCCATCGCC
TTCACGCCGG GCAAGATCGG GCGCGCTTAC GCCGCGCACC CGCTGGCGCT GTCCAAGAAG
CAGGTCGTGC AGATCGCCAA CTTCATCGGC GCATCGCTCG ACTACGCGCA GACCGCGCTG
GAAGAAGACC GGCACCGGCT GGGCACGCTG TGGGTGCTCG GCCACCCCGG CAAGCTCGCC
AAGGTGCTCG ACGGCGTGTG GGACACCCAT TCGAGCAAGA GCGGCATGGC CATGGGCTCC
GTGGCCGCCG TGGCCGCCGA GCTCGGCGTG GCCGCCGCGC TCGTCGAACA GATCAAGACA
GCCAATACCG TGGAAAACGT GATCCAGATT CTGCAACACC AGCCAGGCGC CCAGGCGTTC
TGGACCGAAA TCGAGCAACG CATCGCCGCG CGGATGCAGC CCAGGGTGCC GCGCGCGGAC
CGCGTGGCGG TGCGCCTGTT CGCCATGGAC GGCACGCCGC TGGGCGCGGC CGGCCAGGAG
GCCGGGGCAT GA
 
Protein sequence
MQPSARRPFD LATPAPNGLR RGRTTGTCAT AAVKAALLRL VRGETVDAVE VSLPDPDYCL 
EVPIARIEPL ASGAVRADVL KYAGDDPDNT DGATIFAEVS VNHAGEVRFM AAPGVGTVTQ
PGLRVPPGEP AINPVPRQMM RMAVDEVLAG GANPGFDLAI GCVDGERIAR RTFNPMLGIV
GGISILGTSG IVEPMSLAAW MASIEVYVRV ALGDAPEAIA FTPGKIGRAY AAHPLALSKK
QVVQIANFIG ASLDYAQTAL EEDRHRLGTL WVLGHPGKLA KVLDGVWDTH SSKSGMAMGS
VAAVAAELGV AAALVEQIKT ANTVENVIQI LQHQPGAQAF WTEIEQRIAA RMQPRVPRAD
RVAVRLFAMD GTPLGAAGQE AGA