Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0622 |
Symbol | cbiD |
ID | 1222929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 753312 |
End bp | 754463 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240482 |
Product | cobalamin biosynthesis D transmembrane protein |
Protein accession | NP_522183 |
Protein GI | 17548843 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.158551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCAT CTGCCCGCCG CCCCTTCGAC CTCGCCACGC CCGCGCCCAA CGGCCTGCGG CGCGGCCGCA CGACCGGCAC CTGCGCCACC GCCGCGGTCA AGGCGGCGCT GCTCAGGCTG GTGCGCGGCG AGACGGTCGA TGCGGTAGAG GTCAGCCTGC CGGATCCGGA CTACTGCCTG GAGGTCCCCA TCGCGCGCAT CGAGCCACTG GCCAGCGGTG CGGTGCGCGC CGACGTGCTC AAGTACGCCG GGGACGATCC GGACAACACC GACGGCGCCA CGATCTTCGC CGAGGTCTCG GTCAACCACG CGGGCGAGGT GCGCTTCATG GCGGCGCCGG GCGTGGGCAC CGTCACCCAG CCGGGCCTGC GTGTGCCGCC CGGCGAGCCG GCCATCAACC CGGTGCCGCG CCAGATGATG CGCATGGCGG TGGACGAAGT GCTGGCCGGC GGCGCCAACC CCGGCTTCGA CCTGGCGATC GGCTGCGTGG ACGGCGAGCG CATCGCCCGC CGCACCTTCA ACCCGATGCT GGGCATCGTG GGCGGCATCT CCATCCTCGG CACCAGCGGC ATTGTCGAGC CGATGTCGCT GGCGGCGTGG ATGGCGTCGA TCGAGGTGTA CGTGCGCGTG GCGCTGGGCG ATGCGCCCGA GGCCATCGCC TTCACGCCGG GCAAGATCGG GCGCGCTTAC GCCGCGCACC CGCTGGCGCT GTCCAAGAAG CAGGTCGTGC AGATCGCCAA CTTCATCGGC GCATCGCTCG ACTACGCGCA GACCGCGCTG GAAGAAGACC GGCACCGGCT GGGCACGCTG TGGGTGCTCG GCCACCCCGG CAAGCTCGCC AAGGTGCTCG ACGGCGTGTG GGACACCCAT TCGAGCAAGA GCGGCATGGC CATGGGCTCC GTGGCCGCCG TGGCCGCCGA GCTCGGCGTG GCCGCCGCGC TCGTCGAACA GATCAAGACA GCCAATACCG TGGAAAACGT GATCCAGATT CTGCAACACC AGCCAGGCGC CCAGGCGTTC TGGACCGAAA TCGAGCAACG CATCGCCGCG CGGATGCAGC CCAGGGTGCC GCGCGCGGAC CGCGTGGCGG TGCGCCTGTT CGCCATGGAC GGCACGCCGC TGGGCGCGGC CGGCCAGGAG GCCGGGGCAT GA
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Protein sequence | MQPSARRPFD LATPAPNGLR RGRTTGTCAT AAVKAALLRL VRGETVDAVE VSLPDPDYCL EVPIARIEPL ASGAVRADVL KYAGDDPDNT DGATIFAEVS VNHAGEVRFM AAPGVGTVTQ PGLRVPPGEP AINPVPRQMM RMAVDEVLAG GANPGFDLAI GCVDGERIAR RTFNPMLGIV GGISILGTSG IVEPMSLAAW MASIEVYVRV ALGDAPEAIA FTPGKIGRAY AAHPLALSKK QVVQIANFIG ASLDYAQTAL EEDRHRLGTL WVLGHPGKLA KVLDGVWDTH SSKSGMAMGS VAAVAAELGV AAALVEQIKT ANTVENVIQI LQHQPGAQAF WTEIEQRIAA RMQPRVPRAD RVAVRLFAMD GTPLGAAGQE AGA
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