Gene RSp0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0621 
SymbolcbiL 
ID1222928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp752584 
End bp753315 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID637240481 
Productprecorrin-2 C20-methyltransferase protein 
Protein accessionNP_522182 
Protein GI17548842 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0818985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TCGGCCGTTT CACCGGCATC GGCGTCGGCC CAGGCCCTGC CGGGCTGATT 
CCCGTGGCCG CGCTCGAGGC GCTCAACGCC GCCGACCTGA TCTACCTGCC GCGCGCACGC
GACAGCGAGG CCTCCGTGGC GCGCCAGTGC CTGGCCGGGC TGGCGGTGCC GGACACCAAG
CTGCGCGAGA TCGCGTTCCA GATGGACCCT GACCGCAGCG TGCTGTCGCA GCACTACGCC
GAACTGGCCG GCACCGTCGC GGCCGAGCTG CGCGCCGGGC GCAACGTGGC CTACCTGACC
CTCGGCGATT CGCTCACGTA TTCCACCTAC GGCTACCTGC TGGCCGCGCT GCGCGATGCG
CTGCCGGCGC TGGAGCACGT CACCTTCCCC GGCATCACCA GCTTCGCGGC GGTGGCCTCG
GCGCTGTCGT GGCCGCTGGG CGAGGGCAAG GAGCGCATCC TGATCCTGCC CTGCCCCGAC
GACATGGAAG CGCTGCGCGC CGACATCGCC AGCCACGACA TCGTGGTGCT GATGAAGATC
GGCGCGCGGC TGCCGGCCGT GCTGGGTCTG CTCAACGCGA TGGGGATCGC GCAGCATTGC
GCCTTCGCCC GCCGCATCGG CCTGCCGGGC GAGGTGCTGT GCGACGACGT GCGCGCGCTG
TCGGCGGACG CGAGCGGCTA CCTCGCCACC ATGCTGATCC GCCGCACCGC CAGGGAGAAG
CGTCACGCAT GA
 
Protein sequence
MTALGRFTGI GVGPGPAGLI PVAALEALNA ADLIYLPRAR DSEASVARQC LAGLAVPDTK 
LREIAFQMDP DRSVLSQHYA ELAGTVAAEL RAGRNVAYLT LGDSLTYSTY GYLLAALRDA
LPALEHVTFP GITSFAAVAS ALSWPLGEGK ERILILPCPD DMEALRADIA SHDIVVLMKI
GARLPAVLGL LNAMGIAQHC AFARRIGLPG EVLCDDVRAL SADASGYLAT MLIRRTAREK
RHA