Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0620 |
Symbol | cbiF |
ID | 1222927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 751772 |
End bp | 752587 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240480 |
Product | precorrin-4 C11-methyltransferase protein |
Protein accession | NP_522181 |
Protein GI | 17548841 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2875] Precorrin-4 methylase |
TIGRFAM ID | [TIGR01465] precorrin-4 C11-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.263132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTGT ATTTCATCGG TGCCGGGCCC GGCGCCGCCG ACCTCATCAC GCTGCGCGGC GCGCGCATCC TGGGCAGCGT GCCGATGGTG CTGTACGCGG GCTCGCTGGT GCCGCCCGAG ATGCTGCAGC ACTGCCGCCC CGACGCCGAA CTGCACGACA CCGCCACCCT GTCGCTCGAC GAGCAGGAAG CCTGCTACCG CCGCGCGCAG GCCGAGGGCA AGGACGTGGC GCGCCTGCAC TCGGGCGACC CGGCCATCTA CGGCGCCACC GCCGAGCAGA TGCGCCGGCT GGAGGCGCTC GGCATCGACT ACGAGATCGT GCCCGGCGTA TCGTCGTTCA CCGCCGCCGC CGCCGTGCTG GGTGCCGAGC TGACGCGGCC GGCGGTGTCG CAATCGATCG TCCTGACGCG GGTGTCGGGG CGGGCCTCTG CGGTGCCCGA GCTCGAATCC GTCGCGCGCT TCGCCGAGCA CCAGGCCACG ATGTGCATCT TCCTGTCCGG CCAGCGCCTG AAGCAGACCG TGGCCGACCT GCTGCTGCAC TACCCGGCCG ACACGCCGGT GGCGCTGGTG CGCCGCGCCA CCTGGCCCGA CCAGGCCATC CACCGCTGCA CGCTGGGCAC GCTGCTGTTG GAGGTCAGCC AGAAAGACTG GCTGCTGACC ACCTTGTTGC TGGTCGGGCG CGCGCTGTCG CGCGAGGGCG GCGTGGAGTC CAGCCTGTAC GCGGCCGGCT TCACGCACAT CTTCCGCGAC GGCACCGACC GCAAAGCCCC GCGCCGCCGC CCGCGCAAAG CGCCCGCCGG CAAGGAGACC GCATGA
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Protein sequence | MKVYFIGAGP GAADLITLRG ARILGSVPMV LYAGSLVPPE MLQHCRPDAE LHDTATLSLD EQEACYRRAQ AEGKDVARLH SGDPAIYGAT AEQMRRLEAL GIDYEIVPGV SSFTAAAAVL GAELTRPAVS QSIVLTRVSG RASAVPELES VARFAEHQAT MCIFLSGQRL KQTVADLLLH YPADTPVALV RRATWPDQAI HRCTLGTLLL EVSQKDWLLT TLLLVGRALS REGGVESSLY AAGFTHIFRD GTDRKAPRRR PRKAPAGKET A
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