Gene RSp0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0618 
SymbolcbiJH 
ID1222925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp749455 
End bp751014 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content72% 
IMG OID637240478 
Productbifunctional: precorrin-3 methyltransferase/precorrin-6X reductase oxidoreductase protein 
Protein accessionNP_522179 
Protein GI17548839 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase
[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase
[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.157389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA AGCTGTATCT GGTCTCGGTC GGGCCCGGCA CCCGCGAACT GATCCCGCCG 
ATGGTCAAGA CGGCCCTGGA CGCGGCCGAC GTGATCGTCG CCTACGACCT CTACCTGACC
TGGATCGCGC CGTGGATCAC GGCCAAGGAC ATCCGCACGC TGCCGCTCAC GCAGGAGCGC
GGCCGCGCCG AGCTGGCGAT CGCCGAGGCG CGCGCCGGGC GCACGGTGGC CCTGATCTCC
AGCGGCGACA TCGGCATCTA CGCCATGGCC GCGCTGGCGT TCGAAGCGAT GGCCGAGCAC
GACACCTTCG ACGTGCAGGT CATTCCCGGC ATCACCTCGG CCAATGCCTG CGCCTCGCTG
CTGGGCTCGC CGCTGTCGCA CGACTTCGCC ACGCTGAGCC TGTCCGACCT GCTGTGCCCG
TGGGCGTGGA TCGAAACGCG CGCGCGCCAC ATCGCCCAGG CCGACCTGGC CGTGGTGCTC
TACAACGTGC AGAGCCGCCA GCGGCAGGAA GGCGTCTACC GCATCCTCGA CATCCTGCTC
GAGCACAAGC GCGCCGAAAC GCTCTGCGGC ATCGTCCACA ACGCCTACCG CGACGGCCAG
GCCGCCGAGA TCGTCACGCT GGCCGAGCTG CGCACGCGCC GCTTCGACAT GCTGACCTCG
CTGGTGATCG GCAACCGCTT CACGCGCCGC AAGCGCGGCT GGATCTACAC CCCGCGCGGC
TACGGCAACT GGGACGACAC GCCGGACACC GTCACCGCGG CCGGCCTGCC CGCGCATGCG
GTCTGGGTGT TCTCCGGCAC CAGCGACGGC AACGCACTGG CGCGCGACAT CGCTGCCACG
GGCCGGGCCG TCGTGGTGTC GAGCGCCAGC GACTACGGCG CCGCGCTGGC CGGGCAGAAC
TGCCCCGGCG TGGCCGTGGT GGCCGGCCGG CTCGGCATCG AGCGCCGCCG CGAGCTGCTG
CGCGAAAGCG CCGCGCACGC CATCGTCGAC GCCACCCACC CGTATGCGGC CGAGATGTCG
CAGCAGCTGA TCCGGCTCGC ACAGGAGCTG GCGCTGCCCT ACCTGCGCTA CGAACGTCCG
GGCGATGCCC AAGCCGCCCC GGCGCAGCGG GCCGCGTCGA TGGAAGACGC CGCGCGCCTG
GCAATGCAGC ACGGCCGGCG CATCTTCCTG GCCACCGGCT CGAAAGACCT CGCCACCTTC
GTCAACGCGG ACGCCGCCGG CCGGCACGCC TGGTTCGTGC GCGTCGCGCC GGACCCGGCC
CACCTGCAGC GCGCCATCGA CGCGGGCATT CCGCGCGCAC GGCTGGTGGC GATGCAGGGC
CCGTTCTCGC AGGCCGCCAA CGAAGCGCTG TGGCGCGACT GGGGCATCGA CTGCGTGGTG
ACGAAGGACT CGGGCGAAGC CGGCGGCTAC CACGCCAAGG CCGCGGCCGC CGCCGCGCTC
GGCATCCCCC TGATCGTGGT CGACCGCCCG GCCATCGACT ACCCGGCGGT GGCGCATGAC
TTTGCCGGCG TGCTGATGCA GCTCGCCGAT CTGGCCGACC GGAACAACGT CGAGGCTTGA
 
Protein sequence
MSGKLYLVSV GPGTRELIPP MVKTALDAAD VIVAYDLYLT WIAPWITAKD IRTLPLTQER 
GRAELAIAEA RAGRTVALIS SGDIGIYAMA ALAFEAMAEH DTFDVQVIPG ITSANACASL
LGSPLSHDFA TLSLSDLLCP WAWIETRARH IAQADLAVVL YNVQSRQRQE GVYRILDILL
EHKRAETLCG IVHNAYRDGQ AAEIVTLAEL RTRRFDMLTS LVIGNRFTRR KRGWIYTPRG
YGNWDDTPDT VTAAGLPAHA VWVFSGTSDG NALARDIAAT GRAVVVSSAS DYGAALAGQN
CPGVAVVAGR LGIERRRELL RESAAHAIVD ATHPYAAEMS QQLIRLAQEL ALPYLRYERP
GDAQAAPAQR AASMEDAARL AMQHGRRIFL ATGSKDLATF VNADAAGRHA WFVRVAPDPA
HLQRAIDAGI PRARLVAMQG PFSQAANEAL WRDWGIDCVV TKDSGEAGGY HAKAAAAAAL
GIPLIVVDRP AIDYPAVAHD FAGVLMQLAD LADRNNVEA