Gene RSp0616 details

Gene Information

• Locus tag: RSp0616
• Symbol: cobA
• ID: 1222923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 747713
• End bp: 748315
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637240476
• Product: cob(I)yrinic acid a,c-diamide adenosyltransferase
• Protein accession: NP_522177
• Protein GI: 17548837
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2109] ATP:corrinoid adenosyltransferase
• TIGRFAM ID: [TIGR00708] cob(I)alamin adenosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.409521
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAACCG ACCCCGCCGC GCACCAGCGC ATGACCGAAC GTCGCAAGGC CGGCTTCGAG 
AAGAAGAAGG CCGCCGCCAC CGGCGAGAAA GGCCTGCTGA TCGTCCACAC CGGCACCGGC 
AAGGGCAAGA GCAGCGCGGC CTTCGGCATG GGGCTGCGCG TGGTCGGGCA TGGCATGCGC 
CTGGGCGTGG TCCAGTTCAT CAAGGGCGCG CTGCATACCG CCGAGCGCGA CCTGCTGGGC 
CGCTTCGACA ACTGCGACTT CCTCACCATG GGCGAGGGCT ACACCTGGAA CACCCAGGAC 
CGCGACGCCG ACATCGCCAC CGCGCGCCAG GGCTGGGCCG AAGCGCGCCG CATGATCGAA 
AGCGGCGACT ACGCGATGGT GATCCTCGAC GAGCTCAATA TCGTGCTCAA GTACGACTAC 
CTGCCGCTCG ACGAGGTGCT GGCGGTACTC GCCGCGCGCC CGGCCGCGCT GCACGTGGTC 
ATCACCGGCC GCCACGCGCC CGAGGCACTG GTCGAAGCCG CCGACCTGGT GACCGAAATG 
CGCCTGGTCA AGCACCCCTA CCGCGAACAG GGCATCAAGG CGCAGCGCGG CGTGGAGTAC 
TGA 

 

Protein sequence

MKTDPAAHQR MTERRKAGFE KKKAAATGEK GLLIVHTGTG KGKSSAAFGM GLRVVGHGMR 
LGVVQFIKGA LHTAERDLLG RFDNCDFLTM GEGYTWNTQD RDADIATARQ GWAEARRMIE 
SGDYAMVILD ELNIVLKYDY LPLDEVLAVL AARPAALHVV ITGRHAPEAL VEAADLVTEM 
RLVKHPYREQ GIKAQRGVEY