Gene RSp0607 details

Gene Information

• Locus tag: RSp0607
• Symbol: paaD
• ID: 1222914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 739793
• End bp: 740341
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637240467
• Product: phenylacetic acid degradation protein
• Protein accession: NP_522168
• Protein GI: 17548828
• COG category: [R] General function prediction only
• COG ID: [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme
• TIGRFAM ID: [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.520929
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGGGCACG CGCTTTCCGT CCGGGCCGAT GCGCAGGCGG ACGCCGCCAG GCTGGTGCGC 
GCACGGGCCG CGCTCGATAC GGTGACGGAC CCGGAGATCC CCGTGGTCTC CATCGCCGAG 
CTGGGCATCC TGCGCGACGT GCGCATCGAC GCGGCCGGCA CGCTGGCGGT GACCATCACG 
CCCACGTATT CCGGCTGCCC GGCCATGGAC CAGATCGCCG ATGACGTGAC CCGCGCGCTG 
CGGGGCGCCG ACGTGGGCGC ATTCCGCGTG CAGACCGTGC TGTCGCCGGC CTGGACGACG 
GACTGGATCA GCATGGAGGG CCGGCGCAAG CTGCATCACT TCGGCATTGC GCCGCCGGCA 
CACGTGGTCG GGGCGGGGGG CGTGCGCCCG ATCCGGCTGG TGCGGCCCGC GGAGGCGGAC 
CGGGTAGCCT GCCCACAGTG CGGGTCGCTC GATACGGTGC GGGTCTCCGC CTTCGGCTCG 
ACCGCGTGCA AGGCGCTCTA CCGCTGCCGT GCGTGCCGCG AACCGTTCGA CTACTTCAAG 
CCGTACTGA 

 

Protein sequence

MGHALSVRAD AQADAARLVR ARAALDTVTD PEIPVVSIAE LGILRDVRID AAGTLAVTIT 
PTYSGCPAMD QIADDVTRAL RGADVGAFRV QTVLSPAWTT DWISMEGRRK LHHFGIAPPA 
HVVGAGGVRP IRLVRPAEAD RVACPQCGSL DTVRVSAFGS TACKALYRCR ACREPFDYFK 
PY