Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0581 |
Symbol | TIS1421a |
ID | 1222888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 717008 |
End bp | 717412 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637240441 |
Product | IS1421-transposase protein A |
Protein accession | NP_522142 |
Protein GI | 17548802 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.814053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAA AGAAGATCAG CAATGAACTG TGGAAGGCAT TGCAACCGCT GCTGCCGGTT GTGGAGCCTT CGACCAAAGG CGGTCGTCCG CGCGTGGATG ATCGGGCGGC GCTCAACGGC ATCCTGTTTG TTCTGCATAC CGGTATCCCG TGGGAAGACC TGCCTAAAGA ACTGGGCTTT GGCAGCGGCA TGACGTGCTG GCGTCGCCTG CGGGAGTGGC AGGCCAACGG CGTTTGGGAG CGGCTGCATT TGGCTCTGCT CAAGCGCCTA CGCGAACACG ACCAGATCGA CTGGAGCCGA GCCAGTGTCG ACGGTGCAAC GGTGGCCAGC CCCCGGGGGG CGAGCAGACG GGGCCGAATC CAACGGATCG CGGCAAGCTC GGTAGCAAGC GCCATCTCGT CGTAG
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Protein sequence | MARKKISNEL WKALQPLLPV VEPSTKGGRP RVDDRAALNG ILFVLHTGIP WEDLPKELGF GSGMTCWRRL REWQANGVWE RLHLALLKRL REHDQIDWSR ASVDGATVAS PRGASRRGRI QRIAASSVAS AISS
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