Gene RSp0510 details

Gene Information

• Locus tag: RSp0510
• Symbol: epsC2
• ID: 1222817
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 635229
• End bp: 636479
• Gene Length: 1251 bp
• Protein Length: 416 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637240370
• Product: UDP-N-acetylglucosamine 2-epimerase protein
• Protein accession: NP_522071
• Protein GI: 17548731
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0381] UDP-N-acetylglucosamine 2-epimerase
• TIGRFAM ID: [TIGR00236] UDP-N-acetylglucosamine 2-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0151376
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAGA TCTTGACCGT ATTCGGCACG CGCCCGGAGG CCATCAAGAT GGCGCCGCTG 
GTGCAGGCGC TGCAGGCTGA GCAGGGCATC GTTTCGTCGG TGTGCGTGAG CGCCCAGCAC 
CGCGAGATGC TCGACCAGGT GTTGCAGCTG TTTGACATCG TGCCCGAGTT CGACCTGAAC 
GTGATGCGCT CCGGGCAGAC GCTGTCCGAT GTCACGTCGG CGGTGCTGGA CGGCATCAAC 
GACGTGCTCG ATGCCTATGC GCCGGATGCC GTGCTCGTGC ACGGCGACAC CACCACCACG 
CTGGCCGCCA GCCTGGCGGC GTTCTACCGC CGCATTCCGG TGGGGCACGT GGAGGCGGGG 
CTGCGCACCG GCAACGTCTG GTCGCCGTGG CCGGAAGAGC TGAACCGGCG CGTGACCGAC 
GCCGTCTCCA CCTGGCACTT CGCGCCCACC GCCGAATCCC GCCAGAACCT GCTGGACGAA 
GGCGTCGAGC CGCAGTGTGT CACGCTCACC GGCAACACCG TCATCGACGC GCTGCTCACC 
GTCAAGCACC GGCTCGATTC GGAGCCGGCG CTGGCCGCGG GCGTCGCCTC GGCGTATCCG 
TTCCTGGACC CGGGCCGCAG GCTGATCCTG GTGACGGGGC ACCGGCGCGA GAACTTCGGC 
GAGCCGTTCG AGCGCTTCTG CGTGGCGCTG CGGCTGCTGG CGGCGCGCCA TCCGGATGTG 
CAGATCGTCT ATCCGGTGCA CCTGAATCCC AACGTGCAGC AGCCGGTGCG CGCCATCCTG 
AGCGGGCACG ACAACGTGCA CCTGATCGAT CCGCAGGACT ACCTGCCGTT CGTCTACCTG 
ATGGACCGCG CCTACCTGAT CGTGACCGAC TCCGGCGGCA TCCAGGAAGA GGCGCCCGCG 
CTCGGCAAGC CGGTGCTGGT CACGCGCGAG ACCACCGAGC GGCCCGAGGC CGTTGCCTCC 
GGCACAGCGC GGCTGGTGGG AACGGACACG GCCCGCATCG TGCACGAAGC CGAGACGCTG 
CTCGACGACA GCGCGGCCTA TCTGCGCATG GCGCACGCCC ACAATCCCTA TGGCGATGGG 
CAGGCCTGCC GGCGCATCGT CGAAGCACTG ATGACGGCGC TGTCCGCGCC GGTGCAGGAC 
GCGCAGCGCG GTCCGCGGCT GGTTCATCTC GATGCGGCGG CGCAAGTGAT CAATCTGGAT 
GCGGCACGCG CCATGGCGCC AGGGCCGTCG ATACAACGCC TGAACGGCTA G 

 

Protein sequence

MKKILTVFGT RPEAIKMAPL VQALQAEQGI VSSVCVSAQH REMLDQVLQL FDIVPEFDLN 
VMRSGQTLSD VTSAVLDGIN DVLDAYAPDA VLVHGDTTTT LAASLAAFYR RIPVGHVEAG 
LRTGNVWSPW PEELNRRVTD AVSTWHFAPT AESRQNLLDE GVEPQCVTLT GNTVIDALLT 
VKHRLDSEPA LAAGVASAYP FLDPGRRLIL VTGHRRENFG EPFERFCVAL RLLAARHPDV 
QIVYPVHLNP NVQQPVRAIL SGHDNVHLID PQDYLPFVYL MDRAYLIVTD SGGIQEEAPA 
LGKPVLVTRE TTERPEAVAS GTARLVGTDT ARIVHEAETL LDDSAAYLRM AHAHNPYGDG 
QACRRIVEAL MTALSAPVQD AQRGPRLVHL DAAAQVINLD AARAMAPGPS IQRLNG