| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0505 |
|---|
| Symbol | serA2 |
|---|
| ID | 1222812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 626596 |
|---|
| End bp | 627630 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637240365 |
|---|
| Product | 2-hydroxyacid dehydrogenase |
|---|
| Protein accession | NP_522066 |
|---|
| Protein GI | 17548726 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCA AGGCGATCGG CATGGCCGCG GACCGCCGCG CTATGATCGC TGGGCGCCGC
GCGGCATCCG AAAGACGCGA CACGTTCCCG CCCCTCCTCA CCATGCAACC CACGCTTCTG
ATCCTGATTG CCATGGCCGC CGATCATCTG GCGCGCATCG GCCAACACTT CCACGTCATC
TATGCCCCCA CCCGCGCCGA GCGCGACGCA GCCGTCACGC GCGATGGCCA TGCCGTGCGC
GTGGTGCTAA CCAACGGCTC GACCGGCCTG AGCGCGCCGG AGATCGCCGC CATGCCGGCG
CTGGAGCTGG CCTGCGCGCT GGGCGCCGGT TACGAAAACA TCGACGTGCA GGCCGCCCGC
GCGCGCGGCG TGGTGGTGGC CAACGGCGCC GGCACCAACG ACGCCTGCGT GGCCGACCAC
GCGATCGGGC TGCTGCTCGC CACCGTGCGC GGCATCCCCA AGCTGGATCG CGCCACGCGC
AACGGCATCT GGCGCGACGA CATCCCGCTG CAGCCGGGCG TGTGGGGCAA GCGGCTGGGC
ATCGTCGGCC TGGGCACCAT CGGCCTGCAG ATCGCGCGGC GCGCCGCCGG CTTCGACATG
CAGATCGGCT ACCACAACCG CAAGCCGCGT GAAAACGTGC CCTACCGCTA CTTCGATGCG
ATCGGGGCGA TGGCCGAATG GGCGGATTTC CTGATCGTCG CCACGCCGGG CGGCGCGCAG
ACGCGCCACC TGGTGAACCG GGACGTGCTG GAAGCGCTGG GCCCCACCGG CTACGTGGTC
AACATCGCGC GCGGCAGCGT GGTGGATACG GCGGCGCTGG AAGCCGCCAT CCGCGCCGGC
AGGCTGGGCG GCGCCGGGCT GGACGTGTAC GAGAGCGAGC CCGCGCCGCC GGCCGGGCTG
CTGGACCTGG AGCAGGTCGT GCTGACGCCG CATATTGCCG GCTGGTCGCC GGAGTCGATC
GCAGCAACGG TGGACCGCTT CCTGGAAAAC GCCCGCCTGC ACCTGGCGGG CGAGGCGGTG
GTGTCGCCGG TCTGA
|
|---|
| Protein sequence | MRGKAIGMAA DRRAMIAGRR AASERRDTFP PLLTMQPTLL ILIAMAADHL ARIGQHFHVI
YAPTRAERDA AVTRDGHAVR VVLTNGSTGL SAPEIAAMPA LELACALGAG YENIDVQAAR
ARGVVVANGA GTNDACVADH AIGLLLATVR GIPKLDRATR NGIWRDDIPL QPGVWGKRLG
IVGLGTIGLQ IARRAAGFDM QIGYHNRKPR ENVPYRYFDA IGAMAEWADF LIVATPGGAQ
TRHLVNRDVL EALGPTGYVV NIARGSVVDT AALEAAIRAG RLGGAGLDVY ESEPAPPAGL
LDLEQVVLTP HIAGWSPESI AATVDRFLEN ARLHLAGEAV VSPV
|
|---|
| |