| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0492 |
|---|
| Symbol | czcB |
|---|
| ID | 1222799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 613752 |
|---|
| End bp | 614966 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637240352 |
|---|
| Product | cobalt-zinc-cadmium resistance protein |
|---|
| Protein accession | NP_522053 |
|---|
| Protein GI | 17548713 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTC CTCGACAACA ACGGCGCGCG ATCGCACTGA TCGTCGCGTT GGGCGCGCTG
GCCGGCGCGG CACTGTGGTG GGGCATGGGC GCGCGGCAAG CGGCCCATGC CGAAAGCGAG
GCCGAGCAGC CGGCCGCGCA CGCTGAGCAC GCGCAGGCGC CGAAGGCCGA AGCCGCCGAG
GCGCCGCACG CCGAGACCAT CGCCATGACC GCCGAAGCCA TCGCCAACGC GGCCATCGGC
GTGGAGACGG CGGGGGCGGC GCAACTGCGC ACAGAGGTGG TCCTGCCGGG CGAGATCCGC
CTGAACGACG ACCGCACGGC CCACGTGGTG CCGCGCGTGG CGGGCGTGGC CGAGCAGGTG
GCGGTGGAGC TGGGCCAGCC GGTCACGCGC GGGCAGCTGC TGGCGGTGCT GTCGAGCCCG
GCGCTGTCGG ACCAGCGCAG CGAACTGCAG GCCGCGCAGC AGCGCCTGGC GCTTGCGCAG
GAAGCGCACG CGCGCGAAAA GCGCCTGTGG GAGCAGGGCA TCGCCGCGGC GCAGGACTAC
CAGCAGGCGC GCACCGCGCT GCAGGAAGCG CGCATCGCCG CGGACAACGC GCGCCAGAAG
CTCGCCGCCA TCGGCGCGGC GCCGGCCGGG ACGGCACTCA ACCGCTTCGA GCTGCGTGCG
CCGTTCGATG GCGTGGTGGT TGCGCGGCAC CTGTCGCAAG GCGAGGCGGT GCAGGCGGAA
GCCGCGGTGT TCACCATTGC CGATCTGCGC ACCGTGTGGG CGGACTTTGC CGTCACGGCC
AAGGACCTGG AGGCGGTGAC CACGCACGCC ACGGCCACGG TGCGCGCCAC GGCCACCGGC
ACGGCGGTGC AGGGCAAGGT CTCGTACGTC GGCGCGCTGC TGGGCGAGCA GACGCGCAGC
GCGCCCGCCC GCGTCACGCT CGACAACCCC AAGCGCGCGT GGCGCCCGGG CATGTTCGTC
AGCGTATCGG TGGAGTCGGG CCGGGTGCCG GTGCCGGTGG CCGTGCGCGC CGATGCCGTG
CAGACCGTCG ACGAGAAGCC CTCGGTGTTC GTGCCCGTGC CGGCCGGCTT CGAAGTGCGC
CCCGTCAAGA CCGGCCGCTC CGACGGCACC TGGACGGAAA TCCTCGACGG CCTGCCCGCC
GGCACCCGCT ATGCCGCCGC CAACAGCTAC GTGCTGAAGG CCGAAGCCGG CAAGTCCGCC
GACCACGGCC ACTGA
|
|---|
| Protein sequence | MTLPRQQRRA IALIVALGAL AGAALWWGMG ARQAAHAESE AEQPAAHAEH AQAPKAEAAE
APHAETIAMT AEAIANAAIG VETAGAAQLR TEVVLPGEIR LNDDRTAHVV PRVAGVAEQV
AVELGQPVTR GQLLAVLSSP ALSDQRSELQ AAQQRLALAQ EAHAREKRLW EQGIAAAQDY
QQARTALQEA RIAADNARQK LAAIGAAPAG TALNRFELRA PFDGVVVARH LSQGEAVQAE
AAVFTIADLR TVWADFAVTA KDLEAVTTHA TATVRATATG TAVQGKVSYV GALLGEQTRS
APARVTLDNP KRAWRPGMFV SVSVESGRVP VPVAVRADAV QTVDEKPSVF VPVPAGFEVR
PVKTGRSDGT WTEILDGLPA GTRYAAANSY VLKAEAGKSA DHGH
|
|---|
| |