| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0475 |
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| Symbol | tISRso17 |
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| ID | 1222782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 589927 |
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| End bp | 591258 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637240335 |
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| Product | ISRSO17-transposase protein |
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| Protein accession | NP_522036 |
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| Protein GI | 17548696 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5659] FOG: Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA GCGACCGATT TGCGGAGTAC ATGAACTACT TGGCTGAGGG ATTGGGGCAT
GCAGATCGCC GGGCCGGCTT GGAGAGCTAT TGCACTGGCC TGATGCTGCC GCTGTCGCGC
AAGAGCGTCG AACCGATGGC GGCACGGGTT GACCCGTTGC ATGCCAGTGC TCGGCATCAG
TCACTGCACC ACTTCGTCTC CAAATCCGAT TGGTCGGATA CGGCGTTGTT AAGCCGTGTC
CGGGACTGGG TTCAGCCCTT GCTGGAAGCG CCAAGCGGTC GCTATTGGAT CATTGACGAC
ACGGGTTTCC CTAAGAAAGG CAAACATTCG GTTGGCGTGG CACGCCAATA TTGCGGCCAG
CTTGGCAAAC AGGACAACTG CCAGGTGGCA GTCAGCCTGT CGCTGGCCAC AGAGCAAGGC
AGCCTTCCGA TTGCCTATCA GCTTTATCTC CCCAAGGAAT GGGCCGACGA TGCGACTCGC
CGCCAGAAGG CCGGCGTGCC TGACGATATC GTGTTCGCCA CCAAGCCGGA GATTGCCCTG
GCGCAAGTGC GCGAGGCGAT CGCAGCCGGG GTGCCAGCCG GAGTCGTGCT GGCCGACGCT
GCATATGGCG ATGAAACCGG GTTTCGCGAA AATCTGACCG AGTTGGGTCT GCTTTACGCC
GTCGGGATTC GCTCCACGAC GACGGTGTGG CCGCCGGGCG TTTCGCCACT GCCGGCCAAA
CCGGCGAGCG GTCCGGGTAG GCCACCGAAG TTGTTGCGTC GCGCACCGGG CCATGAGCCG
GTTTCAGTGA AGACCCTGGC GATGGCATTA CCCTCGAGCG CTTACCAAGT GGTGACTTGG
CGGGAAGGCA TCAATACAGC CCTTTCATCG CGATTTGCGG CCGTGCGGGT TCGCCCGGCG
CATCGGGACT ATTGGCGCAG CACCTTGCGC GACGAAGAAT GGTTGCTGGT TGAGTGGCCG
GGGGGCGAAG CGGAGCCAAC CAAATACTTC TTGTCCACAG CACCAGCCGA TGCGCTGATA
GAACAACTGG TGTTCGTGAC CAAAATGCGT TGGCGTATTG AGCGCGATTA CCAGGACTTG
AAACAAGAGC TCGGCCTTGG TCACTACGAA GGCCGGGGCT GGCGCGGATT CCACCATCAT
GCGACGCTGA GTATCGCAGC CTATGGCTTC CTGATGGCCG AACGACTCGC TGCAGACAAG
CCCGTGGGGA ATAAAAAAAA CTTCCTCGAA TGCCAGATAC CTGCGCTTCC CGCGGATTAC
ATCCCCCGTG GCAGCCCTGC GTGCGCAGCG ACACGTGACG AATTCAATCC CCACACTCCG
TCATCAACTT AG
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| Protein sequence | MSASDRFAEY MNYLAEGLGH ADRRAGLESY CTGLMLPLSR KSVEPMAARV DPLHASARHQ
SLHHFVSKSD WSDTALLSRV RDWVQPLLEA PSGRYWIIDD TGFPKKGKHS VGVARQYCGQ
LGKQDNCQVA VSLSLATEQG SLPIAYQLYL PKEWADDATR RQKAGVPDDI VFATKPEIAL
AQVREAIAAG VPAGVVLADA AYGDETGFRE NLTELGLLYA VGIRSTTTVW PPGVSPLPAK
PASGPGRPPK LLRRAPGHEP VSVKTLAMAL PSSAYQVVTW REGINTALSS RFAAVRVRPA
HRDYWRSTLR DEEWLLVEWP GGEAEPTKYF LSTAPADALI EQLVFVTKMR WRIERDYQDL
KQELGLGHYE GRGWRGFHHH ATLSIAAYGF LMAERLAADK PVGNKKNFLE CQIPALPADY
IPRGSPACAA TRDEFNPHTP SST
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