| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0460 |
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| Symbol | tISRso10b |
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| ID | 1222767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 577528 |
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| End bp | 578130 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637240320 |
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| Product | ISRSO10-transposase ORFB protein |
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| Protein accession | NP_522021 |
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| Protein GI | 17548681 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.112224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTGC ACAGCTTGCT GCTTGAGCGC AGGCCGACGC CACCGCGTCC ACCGCGCCGG
CATGACGGCA AGGTCGCCGT GGCCAAGAGC AACCAGCGCT GGTGCTCCGA TGGCTTCGAG
TTCCGCTGCG ACAACGGCGA GCCGCTGCGG GTGACGTTCG CGCTGGATTG CTGCGACCGC
GAGGCGATGA GCTGGGTGGC GACGACCGGC GGCTACAGCG GCGACGTAGT ACGCGACGTG
ATGCTGGCGG CCGTCGAGCA GCGCTTCGGC AATGTTCCGA AAGCGCCAGC GGAAATTGAA
TGGCTGACGG ACAACGGCTC AGGCTACATT GCTGGGAAGA CTCGCGAGTT CGCCACGGAC
ATTGGCTTGA AGCCATTGAC GACACCGGTT TGCAGCCCGC AGAGCAACGG CATGGCCGAG
AGCTTCGTGA AGACGATGAA GCGCGACTAC GTCGCCTTCA TGCCCAAGCC TGACGCGGCC
ACAGCGACGC GCAACCTCGC CATCGCGTTC GAGCATTACA ACGAGCAGCA TCCCCATAGC
GCACTGAAAT ATCGCTCGCC ACGCGAGTTC AGGCGCAGGA CGGAATCATC AACTCAAGTG
TGA
|
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| Protein sequence | MRVHSLLLER RPTPPRPPRR HDGKVAVAKS NQRWCSDGFE FRCDNGEPLR VTFALDCCDR
EAMSWVATTG GYSGDVVRDV MLAAVEQRFG NVPKAPAEIE WLTDNGSGYI AGKTREFATD
IGLKPLTTPV CSPQSNGMAE SFVKTMKRDY VAFMPKPDAA TATRNLAIAF EHYNEQHPHS
ALKYRSPREF RRRTESSTQV
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