Gene RSp0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0346 
SymbolflgF 
ID1222478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp451199 
End bp451936 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID637240206 
Productflagellar basal-body rod protein FlgF 
Protein accessionNP_521907 
Protein GI17548567 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.937216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.715732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA TGATCTACGT GGCGATGACT GGCGCGAAAC ACCTGTTCGA CCAGCAGGCC 
GCCAGCGCCA ACAATCTCGC CAACTCCAGC ACCACGGGCT TCAAGGCCCA GATCGACGCG
TTCCATACGG TGGGCGTGCA GGGCGACGGC TCGCCGACGC GCAGCTTCGT GATGGCGTCG
GCGATCGGCA CCGACATGAC GCCGGGCCCG ATCGAGACCA CCGGCCGCAG CCTGGACGTG
GCCATCGACG GGCAGGGCTT CTTTGCCGTG CAGACCGCCG ACGGCGGCGA GGCCTACACC
CGCGCCGGCG CGTTCCAGGT GGGGGCGGAC GGCACCATCC AGACGCTGTC CGGCCAGCCG
GTGCTGGGCG ACGGCGGTCC GGTCACGCTG CCGCCCGACA CCACCGTGCA GTTCGCCAAG
GACGGCACGA TCAACGCGAT CAGCGCGGAC AACCGCACGC CGCCCGTGTC GCTGGGGCGG
CTCAAGCTGG TGAGCATCGA TCCGTCCAAC GTCGACCGCG GCACCGACGG CCTGTTCCGG
CAGCGCGACG GCCAGGATGC CAACGTGGAC GAGCGCGTGC GCATCACCGG CGGCGCGCTG
GAAGGCAGCA ACGTCAGCCT GACCGATTCG CTGGTCAACA TGATCGAAAT CTCGCGCCAG
CTGGAGCTGC AGATGAAGGC CCTGCACACC GGCGACACCA ACGCCCAGTC GGCCAACGAA
TTGCTGCGCC ACGCCTGA
 
Protein sequence
MDRMIYVAMT GAKHLFDQQA ASANNLANSS TTGFKAQIDA FHTVGVQGDG SPTRSFVMAS 
AIGTDMTPGP IETTGRSLDV AIDGQGFFAV QTADGGEAYT RAGAFQVGAD GTIQTLSGQP
VLGDGGPVTL PPDTTVQFAK DGTINAISAD NRTPPVSLGR LKLVSIDPSN VDRGTDGLFR
QRDGQDANVD ERVRITGGAL EGSNVSLTDS LVNMIEISRQ LELQMKALHT GDTNAQSANE
LLRHA