Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0346 |
Symbol | flgF |
ID | 1222478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 451199 |
End bp | 451936 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240206 |
Product | flagellar basal-body rod protein FlgF |
Protein accession | NP_521907 |
Protein GI | 17548567 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.937216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.715732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCA TGATCTACGT GGCGATGACT GGCGCGAAAC ACCTGTTCGA CCAGCAGGCC GCCAGCGCCA ACAATCTCGC CAACTCCAGC ACCACGGGCT TCAAGGCCCA GATCGACGCG TTCCATACGG TGGGCGTGCA GGGCGACGGC TCGCCGACGC GCAGCTTCGT GATGGCGTCG GCGATCGGCA CCGACATGAC GCCGGGCCCG ATCGAGACCA CCGGCCGCAG CCTGGACGTG GCCATCGACG GGCAGGGCTT CTTTGCCGTG CAGACCGCCG ACGGCGGCGA GGCCTACACC CGCGCCGGCG CGTTCCAGGT GGGGGCGGAC GGCACCATCC AGACGCTGTC CGGCCAGCCG GTGCTGGGCG ACGGCGGTCC GGTCACGCTG CCGCCCGACA CCACCGTGCA GTTCGCCAAG GACGGCACGA TCAACGCGAT CAGCGCGGAC AACCGCACGC CGCCCGTGTC GCTGGGGCGG CTCAAGCTGG TGAGCATCGA TCCGTCCAAC GTCGACCGCG GCACCGACGG CCTGTTCCGG CAGCGCGACG GCCAGGATGC CAACGTGGAC GAGCGCGTGC GCATCACCGG CGGCGCGCTG GAAGGCAGCA ACGTCAGCCT GACCGATTCG CTGGTCAACA TGATCGAAAT CTCGCGCCAG CTGGAGCTGC AGATGAAGGC CCTGCACACC GGCGACACCA ACGCCCAGTC GGCCAACGAA TTGCTGCGCC ACGCCTGA
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Protein sequence | MDRMIYVAMT GAKHLFDQQA ASANNLANSS TTGFKAQIDA FHTVGVQGDG SPTRSFVMAS AIGTDMTPGP IETTGRSLDV AIDGQGFFAV QTADGGEAYT RAGAFQVGAD GTIQTLSGQP VLGDGGPVTL PPDTTVQFAK DGTINAISAD NRTPPVSLGR LKLVSIDPSN VDRGTDGLFR QRDGQDANVD ERVRITGGAL EGSNVSLTDS LVNMIEISRQ LELQMKALHT GDTNAQSANE LLRHA
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