| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0287 |
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| Symbol | hmsF |
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| ID | 1222419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 372341 |
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| End bp | 374515 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240147 |
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| Product | putative hemin storage signal peptide protein |
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| Protein accession | NP_521848 |
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| Protein GI | 17548508 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0817308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT CCCGATACCC GTCTTTGCGA CGATGCTTCG CCTGGATGGC CGTGCTGGCC
ATGGCGCTGC TCGCCTTTGC GCGGCCGGCC GCCGCCCTGC AGGTGGATTT CCTGCCCAAG
CCCGACCCGG TGGACGGCAA GACCTTCCGC GTGCTGTGCT TCCACGACAT CCGCGACAAC
CTGCGCGCCA GCTTCGAGAC GCTGCCCGAT CCGTTCGCCA TCGATACCAA GATGCTGACC
AACATGTTCA GCTGGCTGCA GGCCAACGGC TACCACCCGG TCACGCTTGA CCAGATCGGC
GAGGCGCGAC GGGGCGGCAA GCCGCTGCCC AGCCGGCCCA TCCTGCTGAC CTTCGATGAC
GGCTACGAGA GCCACTACAC CCGGGTGTTT CCGCTGCTCA AGCAGTTCCG CTTCCCGGCG
GTCTTCGCGC TGGTGACGCA GTGGACCGAC GCGCCGCAGG GGGCCAAGGT CAAGCTGTCG
GACAAGCAGA TCGTGGGGCG CGACTTCTTC ATGAACTGGG ACCAGATCCG CGAGATCCAG
GCCTCCGGCC TGGTGGAGTT CGCCACGCAC ACGCACGACA TGCACCACGG CATGCTGGGC
AACCCGCAGG GCAACGAGAT GCCGGCCGCC AGCACGCACG GCTACCTGCC CAAGCTCGGC
CGCTACGAGA CCGACGACGA ATACCGCAAG CGCGTGCGCG GCGACCTGCA GCGCAGCATC
GACATCATCC AGAAGTACAC CGGCGCCAAG GTGCAGAGCG TGGTGTGGCC CTATGGCGCG
CACAATCTGA CGCTCGACCA GGAAGCCGCC AACGTCGGCC TGAAGTACAT GCTGACGCTG
GAGCCCGGCC CCAACACACC GGACGCGCCG CTTACCGCCA TCCGCCGCAG CCTGATGGGC
TACGACACCG ACACCGGCAG CCTGGAGCGC TCGCTGCGCG AGCCGCTCAC GCATCACGGC
GAGATCAACC CCGTGCAGCG CGTGGTACAG GTCGACATGG ACTACATCTA CGACGCCGAT
CCGCGCCAGC AGGAAGCCAA CCTCGGCCGG CTGATCGAGC GCATCAAGGA CCTCGCGCCC
AAGGTGGTCT ACCTGCAGGC CTTCGCCGAT CCGAAGGGCG ACGGCGCGGT CGATTCGGTG
TACTTCCCCA ACCGCCACAT GCCGATGCGC GCCGACCTCT TCTCGCGCGT GGCGTGGCAG
CTGAAGACGC GCGCCAAGGT GGAGGTGTAT GCGTGGCTGC CGGTGCTGGC GTTCAAGCTG
CCGGAGAAGA ACCCGGCGTC CACGCACCTT GTGCAGGCGG TGCCGGGCGC GCCCGAGAAG
CAGAAGGCCG GCAAGCCGCC GCGGCTGTCG CCGTTCGACC CCGAGGCGCG CCGGCTGATC
CGCGACATCT ATGAAGACCT GGCCAAGTAC GCCATCTTCG ACGGCATCCT GTTCCACGAC
GACGCCGTGC TCGACGACTA CGAAGACGCC AGCCCGGCCG CCCTCAAGGC CTACGAGGCC
ATGGGCCTGC CCGGCGACAT CAATGCGATC CGCCGCTCGC CCGAGCTGAT GCAGAAGTGG
ACGCGCGGCA AGACCGCCGC GCTGATCGCC TTCACCCACG AGCTGATCGG CGTGGTGCAG
GGCTACCAGA ACGGCCGCGA CATGCTGACC GCGCGCAACA TCTTCGCCAG CCCCATCCTC
GACCCCGACG CCGAGAAGTG GACCGCGCAG AACTACGACG ATTTCCTGCA GGCCTACGAC
TACGTGGCGC TCGAAGCCAT GCCCTACATG GAGAACGCCC GCGATCCGAA GGACTGGATG
GCCAAGCTGG TGGCCGCGGT CGGCAAGCAC CGGGACGGCC TGCGCAAGAC CATCTTCGAG
CTGCAGGCGG TGGACTGGCG CGAGCGCGAC AAGCCGGTCC CGACGCCGGA GCTGCGCGAC
CAGATGCGGC GCCTGCGGGC CGCCGGGGCG CTCAACTACG GCTACTACCC CGACGACTTC
ATCGCCGGCC GGCCCGACAC CGAGGTGCTG CGCGACGTGA TGTCGATGAA GACCACCATC
GAGACGCGCC GCGTGCCGAG CCGCGCCGAG GAGCTCAAGT CGATTCCGCC CACCACGGCG
CCGGGCGCGG CCAACGCAGA ACAGCACAAC CCGGTCGCCG GGGCCGGCGG CCAGGCAACC
GGGGCGGGAG GCTGA
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| Protein sequence | MQASRYPSLR RCFAWMAVLA MALLAFARPA AALQVDFLPK PDPVDGKTFR VLCFHDIRDN
LRASFETLPD PFAIDTKMLT NMFSWLQANG YHPVTLDQIG EARRGGKPLP SRPILLTFDD
GYESHYTRVF PLLKQFRFPA VFALVTQWTD APQGAKVKLS DKQIVGRDFF MNWDQIREIQ
ASGLVEFATH THDMHHGMLG NPQGNEMPAA STHGYLPKLG RYETDDEYRK RVRGDLQRSI
DIIQKYTGAK VQSVVWPYGA HNLTLDQEAA NVGLKYMLTL EPGPNTPDAP LTAIRRSLMG
YDTDTGSLER SLREPLTHHG EINPVQRVVQ VDMDYIYDAD PRQQEANLGR LIERIKDLAP
KVVYLQAFAD PKGDGAVDSV YFPNRHMPMR ADLFSRVAWQ LKTRAKVEVY AWLPVLAFKL
PEKNPASTHL VQAVPGAPEK QKAGKPPRLS PFDPEARRLI RDIYEDLAKY AIFDGILFHD
DAVLDDYEDA SPAALKAYEA MGLPGDINAI RRSPELMQKW TRGKTAALIA FTHELIGVVQ
GYQNGRDMLT ARNIFASPIL DPDAEKWTAQ NYDDFLQAYD YVALEAMPYM ENARDPKDWM
AKLVAAVGKH RDGLRKTIFE LQAVDWRERD KPVPTPELRD QMRRLRAAGA LNYGYYPDDF
IAGRPDTEVL RDVMSMKTTI ETRRVPSRAE ELKSIPPTTA PGAANAEQHN PVAGAGGQAT
GAGG
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