| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0277 |
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| Symbol | treA |
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| ID | 1222409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 359061 |
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| End bp | 360716 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240137 |
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| Product | periplasmic alpha,alpha-trehalase signal peptide protein |
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| Protein accession | NP_521838 |
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| Protein GI | 17548498 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.110838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC CCCGTGGCCT TGCACGGCCA TCCCGGTTTT GCCCGCGCAT CATCTACGCC
GGCACCTCGC ACATTCGCCG CGCCACCGCC GCGGCGCTGC TGGCGGCCAG CCTCTGTGCC
CTGCCTGCCT GTGCCGATGT CGGCGTTGGC GCGGCGTTGC CGCTTTCGCC GGACAAGCTC
TATGGCGAAC TGTTCGTCGC CGTGCAGACC GCGCAGGTCT ATCCCGACCA GAAGACCTTC
GTCGATACGG TGCCCAAGGC GGACCCGGCG GTCATCCTGC AGGCCTATCG GGCGCAGAAG
GACGTGCCCG GCTTTTCGCT GAAGGCGTTC GTCGACCAGT ACTTCACCGT GCCGTTCGAG
ACCGTCATCA CGCCGCCCGC CGGGCAGTCG CTGCGCGCGC ACATCAACTG GCTGTGGCCG
GCGCTCACGC GCACCACGGC CACGGCGCCG GACAACAGCT CGCTGATTCC GCTGCCCAAG
CCCTACGTGG TGCCGGGCGG GCGCTTCCGC GAGGTCTACT ACTGGGATAC GTATTTCACG
ATGCTCGGGC TGCAGGCGTC CGGGCGCGAT GATCTCGTCG ACAGCATGCT CGACAACTTC
GCCTACCAGA TCAACCGGTT CGGCCACATC CCCAACGGCA ACCGGACGTA CTACCTGAGC
CGCTCGCAGC CGCCGTTCTT CGCGCTGATG GTGGAGCTCG CGGCCACGAA GGAAGGGGAG
GCCGCCTACA CCCGCTACCT GGCCCCGCTG CGCAAGGAGT ACGCCTACTG GATGCGCGGC
GCCGCCGGCA CGGCCCCCGG GCAAGCCAGC GGCAACGTGG TGGTGCTGCC CGACGGCACC
GTGCTCAACC GCTACTGGGA CGATGAGGCC ACGCCGCGCC CCGAGTCGTA TCTGCAGGAT
GTCGCCACGG CGCAGCAGGC ACCGGACCGC CCCGCCGCCG AGGTCTGGCG CGACCTGCGT
GCCGCCGCCG AGAGCGGCTG GGATTTCAGC TCGCGCTGGT TCGGCGACAG CGCCACGCTG
GCCACCATCC GCACCACGTC CATCCTCCCG GTCGATCTCA ATGCGCTGAT GTTCCAACTG
GAGAAGACCA TCGCCAAGGG CTGCGCCGTG GCGCGCGATT TCGCCTGCAC GGTCGAGTTC
GGCAACCACG CGCGCAAGCG GGCGGTTGCG GTCGAGCGCT ACCTGTGGCA TCCCGCCGGC
TACTACGCGG ATTACGACTG GAAGCTCGGC AAGGTGCGCG ACAACCTGTC GGCGGCCGCG
ACGTATCCGC TGTTCGTGCA GATGGCGCCA TGGGGGCGGG CCCGGCAGAC GCTGCGCCAG
ACGCAGACGG CGCTGCTGCA GGTCGGCGGC TTGTCCACCA CGACGCTGCA CACGCAGCAG
CAGTGGGATG CCCCGAACGG CTGGGCGCCG CTGCAGTGGA TTGCGCTGCA GGCCAGCCAG
CACTATGGCC AGGCGCTGCT GGCCCAGACC ATCGGCGAGC GCTTCCTCGG CAGTGTCGAG
CGCCTGTACG CGGCCGAGCA GAAGCTGGTC GAGAAATACA TCGTCGACGG CAGCGGCACG
GGCGGCGGCG GTGGCGAGTA TCCGCTGCAG GACGGCTTCG GCTGGACCAA CGGCGTGACG
CTCAGGCTGC TCGACGCATA CGGGCGCGGG CAGTGA
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| Protein sequence | MLDPRGLARP SRFCPRIIYA GTSHIRRATA AALLAASLCA LPACADVGVG AALPLSPDKL
YGELFVAVQT AQVYPDQKTF VDTVPKADPA VILQAYRAQK DVPGFSLKAF VDQYFTVPFE
TVITPPAGQS LRAHINWLWP ALTRTTATAP DNSSLIPLPK PYVVPGGRFR EVYYWDTYFT
MLGLQASGRD DLVDSMLDNF AYQINRFGHI PNGNRTYYLS RSQPPFFALM VELAATKEGE
AAYTRYLAPL RKEYAYWMRG AAGTAPGQAS GNVVVLPDGT VLNRYWDDEA TPRPESYLQD
VATAQQAPDR PAAEVWRDLR AAAESGWDFS SRWFGDSATL ATIRTTSILP VDLNALMFQL
EKTIAKGCAV ARDFACTVEF GNHARKRAVA VERYLWHPAG YYADYDWKLG KVRDNLSAAA
TYPLFVQMAP WGRARQTLRQ TQTALLQVGG LSTTTLHTQQ QWDAPNGWAP LQWIALQASQ
HYGQALLAQT IGERFLGSVE RLYAAEQKLV EKYIVDGSGT GGGGGEYPLQ DGFGWTNGVT
LRLLDAYGRG Q
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