Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0242 |
Symbol | glgA |
ID | 1222373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 312692 |
End bp | 314317 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240101 |
Product | glycogen synthase |
Protein accession | NP_521803 |
Protein GI | 17548463 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0297] Glycogen synthase |
TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000133222 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.110435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCTGA ACGTCCTCTT TGTCGCATCG GAAGCGGTGC CGCTGGCCAA GACCGGTGGC TTGGGAGACA TGGTCGGGGC ATGCGCCGGC GCGCTGCAGC GCGCCGGATT GCACGTGACC GTGATGCTGC CGGGGTACCC CGCCGCGCAG GCGCAGCTGC GCGATGCCCG GGTGGCCTGC GCGCTTCCCG ATCTGCCGGG CGGGCCCGCG CGCGTGCTGC TGGGCGCGAT GCCCGATACC GGCGTGCCGG TGCTGCTGCT CGACGCCCCG GCGCTGTTCG ATCGCCCGGG CAACCCGTAC CTCGATGCCT GCGGCGAGCC CTACGCCGAC AACGCGCTGC GCTTCGCCGC GTTCAGCCAT GCGGCCGCGC ACGTGGCCGG CGGCGTGCCC GACCTGCCCG CATTCGACAT CGTGCAGGCG CATGACTGGC ATGCCGCGCT GGTGCCGCTG CTGGTCAAGC GCGCGGGACG GCCGGTCAAG ACGGTCCTGA CCGTGCACAA CCTGGCGTTC CAGGGCAACT TCCCGCCACG TATCGCGCAG GACCTCGGTC TTCCCCCGGA GGCGGTGCGC GAGGCCGGAT TCTTTGGGCA GTTCAGTTTC CTGAAGGCGG GGCTGATGTG GGCCGACCGC ATCACCACCG TGAGCCGGAC CTATGCGCGC GAGATCCTGA CCGACGCGTT CGGCTACGGC ATGCAGGACG TGCTGCGGGC GCGCCGGCAT GACCTCGTCG CCATTCTCAA CGGCATCGAC AACGCGGTGT GGAATCCCTC GAAAGATGCT TACCTGTCGC GGCCGTTTTT CGCGGGCAAC CTGAGTGGCA AGCACGCCGC CAAGCTGCAG CTGCAGACGC TGCTGCGCCT GCCGAAAGAC GCGCATGCGC CACTGCTGGC GCTGGGCAGC CGCCTGACGC ACCAGAAGAT GGCGGACGTG GCGCTGCAGG CGCTGCCGCA GATGCTGGAA GCCCATCCCG ACCTGCAGGT GGCGGTGCTG GGCTGCGGCG AGCGCCGCTA TGAAAGCGCC ATGGCCGCCC TGGCCGAACG GCATCCGCGC CGGATGGCGG CCGTGATCGG CTATACCGAG CGCAACGCGC ACATGCTGCA CGCCGGCGCC GACCTGCTGC TGCACGGCAG CCGTTTCGAG CCGTGCGGCC TGACACCGCT GTATGCCATG CGCTACGGCA CGGTGCCGGT GGCCTCGCGG GTGGGCGGGC TGGTCGACAC GATCGCCGAT CGCGGCTCGC CCGAGGCGGC GCTGCGCGGC GCCACCGGCT TCCTGTTCGA CGGCGAGACG CCCGAGGCCA TGGCGGGCGC GGTGGCGCGC GCGCTGCGCG TGTTCGTCCA GCCGCGCGCA TGGCGCGTCC TGCAATACAA CGGCATGACG ACGGACTTCG GCTGGTCGCA GCCGGCAAGC GAGTACCTAG CGCTGTATGC CACGCTGGCA CCGCGCGCCA CGCCGATGCC GCATCTGCAG CACTGGCCGA TGCGCACGCT TGCGCGGCCC GCGAGCCCCC CGGACACGGC GCCGGTGGGC AAACCCGCGC GCCGGCGCCG GACGACGGCG TTGTCCACCA CGGCCCGCGC GCACCCGGTG GCGCGCGCCG CCGGCCGGGA AAAGATCCGC GCATGA
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Protein sequence | MSLNVLFVAS EAVPLAKTGG LGDMVGACAG ALQRAGLHVT VMLPGYPAAQ AQLRDARVAC ALPDLPGGPA RVLLGAMPDT GVPVLLLDAP ALFDRPGNPY LDACGEPYAD NALRFAAFSH AAAHVAGGVP DLPAFDIVQA HDWHAALVPL LVKRAGRPVK TVLTVHNLAF QGNFPPRIAQ DLGLPPEAVR EAGFFGQFSF LKAGLMWADR ITTVSRTYAR EILTDAFGYG MQDVLRARRH DLVAILNGID NAVWNPSKDA YLSRPFFAGN LSGKHAAKLQ LQTLLRLPKD AHAPLLALGS RLTHQKMADV ALQALPQMLE AHPDLQVAVL GCGERRYESA MAALAERHPR RMAAVIGYTE RNAHMLHAGA DLLLHGSRFE PCGLTPLYAM RYGTVPVASR VGGLVDTIAD RGSPEAALRG ATGFLFDGET PEAMAGAVAR ALRVFVQPRA WRVLQYNGMT TDFGWSQPAS EYLALYATLA PRATPMPHLQ HWPMRTLARP ASPPDTAPVG KPARRRRTTA LSTTARAHPV ARAAGREKIR A
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