Gene RSp0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0242 
SymbolglgA 
ID1222373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp312692 
End bp314317 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content72% 
IMG OID637240101 
Productglycogen synthase 
Protein accessionNP_521803 
Protein GI17548463 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000133222 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.110435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTGA ACGTCCTCTT TGTCGCATCG GAAGCGGTGC CGCTGGCCAA GACCGGTGGC 
TTGGGAGACA TGGTCGGGGC ATGCGCCGGC GCGCTGCAGC GCGCCGGATT GCACGTGACC
GTGATGCTGC CGGGGTACCC CGCCGCGCAG GCGCAGCTGC GCGATGCCCG GGTGGCCTGC
GCGCTTCCCG ATCTGCCGGG CGGGCCCGCG CGCGTGCTGC TGGGCGCGAT GCCCGATACC
GGCGTGCCGG TGCTGCTGCT CGACGCCCCG GCGCTGTTCG ATCGCCCGGG CAACCCGTAC
CTCGATGCCT GCGGCGAGCC CTACGCCGAC AACGCGCTGC GCTTCGCCGC GTTCAGCCAT
GCGGCCGCGC ACGTGGCCGG CGGCGTGCCC GACCTGCCCG CATTCGACAT CGTGCAGGCG
CATGACTGGC ATGCCGCGCT GGTGCCGCTG CTGGTCAAGC GCGCGGGACG GCCGGTCAAG
ACGGTCCTGA CCGTGCACAA CCTGGCGTTC CAGGGCAACT TCCCGCCACG TATCGCGCAG
GACCTCGGTC TTCCCCCGGA GGCGGTGCGC GAGGCCGGAT TCTTTGGGCA GTTCAGTTTC
CTGAAGGCGG GGCTGATGTG GGCCGACCGC ATCACCACCG TGAGCCGGAC CTATGCGCGC
GAGATCCTGA CCGACGCGTT CGGCTACGGC ATGCAGGACG TGCTGCGGGC GCGCCGGCAT
GACCTCGTCG CCATTCTCAA CGGCATCGAC AACGCGGTGT GGAATCCCTC GAAAGATGCT
TACCTGTCGC GGCCGTTTTT CGCGGGCAAC CTGAGTGGCA AGCACGCCGC CAAGCTGCAG
CTGCAGACGC TGCTGCGCCT GCCGAAAGAC GCGCATGCGC CACTGCTGGC GCTGGGCAGC
CGCCTGACGC ACCAGAAGAT GGCGGACGTG GCGCTGCAGG CGCTGCCGCA GATGCTGGAA
GCCCATCCCG ACCTGCAGGT GGCGGTGCTG GGCTGCGGCG AGCGCCGCTA TGAAAGCGCC
ATGGCCGCCC TGGCCGAACG GCATCCGCGC CGGATGGCGG CCGTGATCGG CTATACCGAG
CGCAACGCGC ACATGCTGCA CGCCGGCGCC GACCTGCTGC TGCACGGCAG CCGTTTCGAG
CCGTGCGGCC TGACACCGCT GTATGCCATG CGCTACGGCA CGGTGCCGGT GGCCTCGCGG
GTGGGCGGGC TGGTCGACAC GATCGCCGAT CGCGGCTCGC CCGAGGCGGC GCTGCGCGGC
GCCACCGGCT TCCTGTTCGA CGGCGAGACG CCCGAGGCCA TGGCGGGCGC GGTGGCGCGC
GCGCTGCGCG TGTTCGTCCA GCCGCGCGCA TGGCGCGTCC TGCAATACAA CGGCATGACG
ACGGACTTCG GCTGGTCGCA GCCGGCAAGC GAGTACCTAG CGCTGTATGC CACGCTGGCA
CCGCGCGCCA CGCCGATGCC GCATCTGCAG CACTGGCCGA TGCGCACGCT TGCGCGGCCC
GCGAGCCCCC CGGACACGGC GCCGGTGGGC AAACCCGCGC GCCGGCGCCG GACGACGGCG
TTGTCCACCA CGGCCCGCGC GCACCCGGTG GCGCGCGCCG CCGGCCGGGA AAAGATCCGC
GCATGA
 
Protein sequence
MSLNVLFVAS EAVPLAKTGG LGDMVGACAG ALQRAGLHVT VMLPGYPAAQ AQLRDARVAC 
ALPDLPGGPA RVLLGAMPDT GVPVLLLDAP ALFDRPGNPY LDACGEPYAD NALRFAAFSH
AAAHVAGGVP DLPAFDIVQA HDWHAALVPL LVKRAGRPVK TVLTVHNLAF QGNFPPRIAQ
DLGLPPEAVR EAGFFGQFSF LKAGLMWADR ITTVSRTYAR EILTDAFGYG MQDVLRARRH
DLVAILNGID NAVWNPSKDA YLSRPFFAGN LSGKHAAKLQ LQTLLRLPKD AHAPLLALGS
RLTHQKMADV ALQALPQMLE AHPDLQVAVL GCGERRYESA MAALAERHPR RMAAVIGYTE
RNAHMLHAGA DLLLHGSRFE PCGLTPLYAM RYGTVPVASR VGGLVDTIAD RGSPEAALRG
ATGFLFDGET PEAMAGAVAR ALRVFVQPRA WRVLQYNGMT TDFGWSQPAS EYLALYATLA
PRATPMPHLQ HWPMRTLARP ASPPDTAPVG KPARRRRTTA LSTTARAHPV ARAAGREKIR
A