| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0238 |
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| Symbol | glgX |
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| ID | 1222369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 300326 |
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| End bp | 302590 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240097 |
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| Product | glycogen operon protein GlgX |
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| Protein accession | NP_521799 |
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| Protein GI | 17548459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.137822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.662509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGTC TTCCCAGCCA CCTCTCCCCC GGCAAGCCAT ACCCCTTAGG CGCCCAATGG
GACGGCCTGG GCATCAATTT CGCCGTCTTC TCGGCCAACG CCACCCGCAT CGATCTCTGC
CTGTTCGACC CCACCGGCCG CAAGGAGCTG GCGCGCCTGC CATTGCCGGA GTGCACCGAT
GAAGTCTGGC ACGGCTACCT GCCCGGCGTG GAATCGGGCC TGGTCTACGG CTACCGTGCC
TACGGCCCGT GGGAGCCGTA TCGCGGCCAC CGCTTCAATC CGCACAAGCT GCTGCTCGAC
CCCTATGCCC GCCGCCTGGT GGGCGCGCTG CGCTGGTCCG ATGCGCTGTT CGGCTATCGC
CTGAACTCCT CCCGCGCCGA TCTGTCGTTC GACCGGCGCG ACAGCGCACC CGCCTGCCCC
AAGGCCGTGG TGACGGACGA GTCGTTCAAC TGGGGCAACG ATGTGCGGCC CAACACGCCG
TGGTCGCGTA CGGTGATCTA CGAGATGCAC GTGCGCGGCG CATCGATGCT GCGCGACGAT
CTGCTGCCGC CCGAGCGCGG CACCTTTGCG GCCCTGGCCG ATCCAGTCTT CATCGAGCAT
CTGCGGGCGC TGGGCGTGAC GGCGGTGGAG CTGCTGCCCG TGCACGCCTT CCTGCAGGAC
CGCTTCCTGG TCGAGCGCGG CCTGCGCAAC TACTGGGGCT ACAGCACGCT GGCATTCTTC
GCGCCGGAGC CGGCTTACCT GTCGACGCCC ACGCTGCACG AGATGAAGGT GGCGATCCGG
CGGCTGCACG CGGCGGGCAT CGAAGTGCTG CTCGACGTGG TGTTCAACCA CACCTGCGAA
GGCAACGAGC TGGGGCCGAC GCTGTCGTTC CGCGGGCTGG ACAACGCGAG CTACTACCGG
CTGGTGCCGG GCCAGGAGCG CTACTACATC AACGACACGG GCTGCGGCAA TACGCTCAAC
CTGTCGCACC CGCGCGTGCT GCAGATGGTG ATGGATGCGC TGCGCTACTG GGTCAACGCC
TGCCATATCG ACGGCTTCCG CTTCGACCTG GGCGTGACGC TGGGGCGCGA GGGGCTCGGC
TTCGATCCGG GCTCGGGGTT CTTCGATGCC GTGCGGCAGG ACCCGGTGCT CGCCACCGTC
AAGACGATCG CCGAGCCGTG GGATGTCGGG CCCGACGGCT ACCAGCTCGG CAACCATCCG
CCCGGCTTCG CCGAATGGAA CGACCGCTTC CGCGACGGCG TCCGGCGCTT CTGGCGCGGC
GACGCCGGGC AGCGCCCGGA GTTGGCCGCG CGGCTCACGG GCAGCGGCGA CCTGTTCGGG
CGGCGCTACC GGCGGCCGTG GGCCTCGATC AACTATGCCG CTTCGCACGA CGGCTTCACG
CTGCGCGACG TGGTCAGCTA CACCCACCGG CACAACGAAG CCAACGGCGA AGACAACCGC
GACGGCCACC ACGACAACTG CAGCGCCAAC TGGGGCGTCG AAGGCCCGAC CGACGACGCC
GCCATCCTGG CCCAGCGGGC CCGGGTGGCG CGCGCGCTGC TGGCCACCGT CCTGCTCTCC
AACGGCACGC CGATGCTGCT GGGCGGCGAC GAATTCGGCC GCACGCAGCA GGGCAACAAC
AACGCCTATT GCCAGGACAA CGCGATCTCG TGGCTGGACT GGTCGATGCG CGCGCAGGCC
GAAGGGCGGG CGCTGTTCGC TTATACCGCG CGCCTGATCG CGCTGCGCAA GACCAGCCCC
GCCCTGCGCT GGCCGCACTT CGTGCACGGC GAGGCGGAGG TGCTGCCCGG CGTGCCGGAC
ATCGCCTGGT TCGACGAGCG CGGCCAACCG CTCACGCCCG ACGCCTGGAA CGACGCCGAG
GCCCGCGCGC TGGCGCTGCG CCGCGCCTGC ATCGAGACCA TCGACGGCGA GGCGCGGCCG
CACGTGGCGC TGACGCTGAT CAACGGCGCC GCCGCCGACC TGATCTTCAC GCTGCCCGGG
CCCGCCATGG ACTGGCTGCT CGCCATCGAC AGCGCCGCGC CCGAGCGCGA GGCACGGCCC
CATGCCGAAC CGACCGTGCG GGTGCAGGGA CGCAGCGTGG TGCTGCTGCT CGCCACGCAG
CTCGCCGCGA TCGCGCAGAT CGCCTCGGCG CCCGAACGCG AAGCCGCCGG CCAGACGGTC
GGCCGCGTGC CCGACAGGCC GGTCGAAGCC GGTGCCGGTG CCGGCGTGCA GCCCCATCCC
GACGAAACCG TGCCCGCCAC CGGCCAGGGA GAGGCCTTGC CATGA
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| Protein sequence | MLRLPSHLSP GKPYPLGAQW DGLGINFAVF SANATRIDLC LFDPTGRKEL ARLPLPECTD
EVWHGYLPGV ESGLVYGYRA YGPWEPYRGH RFNPHKLLLD PYARRLVGAL RWSDALFGYR
LNSSRADLSF DRRDSAPACP KAVVTDESFN WGNDVRPNTP WSRTVIYEMH VRGASMLRDD
LLPPERGTFA ALADPVFIEH LRALGVTAVE LLPVHAFLQD RFLVERGLRN YWGYSTLAFF
APEPAYLSTP TLHEMKVAIR RLHAAGIEVL LDVVFNHTCE GNELGPTLSF RGLDNASYYR
LVPGQERYYI NDTGCGNTLN LSHPRVLQMV MDALRYWVNA CHIDGFRFDL GVTLGREGLG
FDPGSGFFDA VRQDPVLATV KTIAEPWDVG PDGYQLGNHP PGFAEWNDRF RDGVRRFWRG
DAGQRPELAA RLTGSGDLFG RRYRRPWASI NYAASHDGFT LRDVVSYTHR HNEANGEDNR
DGHHDNCSAN WGVEGPTDDA AILAQRARVA RALLATVLLS NGTPMLLGGD EFGRTQQGNN
NAYCQDNAIS WLDWSMRAQA EGRALFAYTA RLIALRKTSP ALRWPHFVHG EAEVLPGVPD
IAWFDERGQP LTPDAWNDAE ARALALRRAC IETIDGEARP HVALTLINGA AADLIFTLPG
PAMDWLLAID SAAPEREARP HAEPTVRVQG RSVVLLLATQ LAAIAQIASA PEREAAGQTV
GRVPDRPVEA GAGAGVQPHP DETVPATGQG EALP
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