| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0222 |
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| Symbol | vanA |
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| ID | 1222353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 277298 |
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| End bp | 278326 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240081 |
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| Product | vanillate O-demethylase oxygenase subunit oxidoreductase protein |
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| Protein accession | NP_521783 |
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| Protein GI | 17548443 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000016692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0221534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTCA AGAACGCCTG GTACGTAGCC TGCACCCCCG ATGAGATCGC CGACAAGCCG
CTGGGCCGCC GCATCTGCGG CGAGCGCATG GTGTTCTACC GCGGCCAGGA GGGCAAGGTG
GCCGCGCTGG AAGACTTCTG CCCGCACCGC GGCGCGCCGC TGTCGCTCGG CTTTGTGCGT
GACGGCCACC TCGTGTGCGG CTACCACGGC CTGACCATGA AGGCCGATGG CAAGTGCGCC
AGCATGCCGG GCCAGCGGGT GGGCGGCTTT CCGTGCATCC GGCAGTTTCC GGTGGTGGAG
CGCTACGGCT TCATCTGGGT CTGGCCGGGC GATCCGGAGC AGGCCGATCC CGCCCGGATC
CATCACCTGG AATGGGCCGA GAGCGAGGCG TGGGCATACG GCGGCGGCCT GTACCACATC
CAGTGCGACT ACCGGCTGAT GATCGACAAC CTGATGGATC TCACGCACGA AACCTACGTG
CATGCCACCA GCATCGGCCA GCCGGAGATC GAAGAGGCGG CGCCGCAGAC CAAGGTGGAG
GGCGACGCCG TCGTCACCAG CCGCTTCATG GAGAACATCA TGCCGCCGCC GTTCTGGGCC
ACCGCGCTGC GCGGCGCCGG CCTGGCGGAC GACGTGCCGT GCGACCGCTG GCAGATCTGC
CGCTTCACGC CGCCCAGCCA CGTGCTGATC GAGGTGGGCG TGGCCCACGC GGGCAAGGGC
GGCTACCATG CCGCGCCCGA GCACCGGGTC GGCAGCATCG TGGTCGACTT CATCACCCCG
GAGACCGAGA CCTCGATCTG GTACTTCTGG GGCATGGCGC GCAACTTCAG GGTGGACGAT
GCGGCGCTGA CCGACACCAT CCGTCAGGGC CAGGGCAAGA TCTTCAGCGA AGACCTCGAC
ATGCTCGAAT CGCAGCAGCG CAACCTGCTG GCGTATCCAG AGCGCAATCT GCTCAAGCTC
AACATCGATG CCGGCGGCGT GCAGTCGCGC CGCGTGCTGG AGCGGCTGCT CGAGCGCGAG
CGGCAGTAA
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| Protein sequence | MFLKNAWYVA CTPDEIADKP LGRRICGERM VFYRGQEGKV AALEDFCPHR GAPLSLGFVR
DGHLVCGYHG LTMKADGKCA SMPGQRVGGF PCIRQFPVVE RYGFIWVWPG DPEQADPARI
HHLEWAESEA WAYGGGLYHI QCDYRLMIDN LMDLTHETYV HATSIGQPEI EEAAPQTKVE
GDAVVTSRFM ENIMPPPFWA TALRGAGLAD DVPCDRWQIC RFTPPSHVLI EVGVAHAGKG
GYHAAPEHRV GSIVVDFITP ETETSIWYFW GMARNFRVDD AALTDTIRQG QGKIFSEDLD
MLESQQRNLL AYPERNLLKL NIDAGGVQSR RVLERLLERE RQ
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