| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0156 |
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| Symbol | tISRso17 |
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| ID | 1222559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 180484 |
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| End bp | 181821 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637240015 |
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| Product | ISRSO17-transposase protein |
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| Protein accession | NP_521717 |
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| Protein GI | 17548377 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5659] FOG: Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0179045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGG CACCACAGGA AAACGAATTG TTCAGGACGG ACTACTTGGC TGAGGGATTG
GGGCATGCAG ATCGCCGGGC CGGCTTGGAG AGCTATTGCA CTGGCCTGAT GCTGCCGCTG
TCGCGCAAGA GCGTCGAACC GATGGCGGCA CGGGTTGACC CGTTGCATGC CAGTGCTCGG
CATCAGTCAC TGCACCACTT CGTCTCCAAA TCCGATTGGT CGGATACGGC GTTGTTAAGC
CGTGTCCGGG ACTGGGTTCA GCCCTTGCTG GAAGCGCCAA GCGGTCGCTA TTGGATCATT
GACGACACGG GTTTCCCTAA GAAAGGCAAA CATTCGGTTG GCGTGGCACG CCAATATTGC
GGCCAGCTTG GCAAACAGGA CAACTGCCAG GTGGCAGTCA GCCTGTCGCT GGCCACAGAG
CAAGGCAGCC TTCCGATTGC CTATCAGCTT TATCTCCCCA AGGAATGGGC CGACGATGCG
ACTCGCCGCC AGAAGGCCGG CGTGCCTGAC GATATCGTGT TCGCCACCAA GCCGGAGATT
GCCCTGGCGC AAGTGCGCGA GGCGATCGCA GCCGGGGTGC CAGCCGGAGT CGTGCTGGCC
GACGCTGCAT ATGGCGATGA AACCGGGTTT CGCGAAAATC TGACCGAGTT GGGTCTGCTT
TACGCCGTCG GGATTCGCTC CACGACGACG GTGTGGCCGC CGGGCGTTTC GCCACTGCCG
GCCAAACCGG CGAGCGGTCC GGGTAGGCCA CCGAAGTTGT TGCGTCGCGC ACCGGGCCAT
GAGCCGGTTT CAGTGAAGAC CCTGGCGATG GCATTACCCT CGAGCGCTTA CCAAGTGGTG
ACTTGGCGGG AAGGCATCAA TACAGCCCTT TCATCGCGAT TTGCGGCCGT GCGGGTTCGC
CCGGCGCATC GGGACTATTG GCGCAGCACC TTGCGCGACG AAGAATGGTT GCTGGTTGAG
TGGCCGGGGG GCGAAGCGGA GCCAACCAAA TACTTCTTGT CCACAGCACC AGCCGATGCG
CTGATAGAAC AACTGGTGTT CGTGACCAAA ATGCGTTGGC GTATTGAGCG CGATTACCAG
GACTTGAAAC AAGAGCTCGG CCTTGGTCAC TACGAAGGCC GGGGCTGGCG CGGATTCCAC
CATCATGCGA CGCTGAGTAT CGCAGCCTAT GGCTTCCTGA TGGCCGAACG ACTCGCTGCA
GACAAGCCCG TGGGGAATAA AAAAAACTTC CTCGAATGCC AGATACCTGC GCTTCCCGCG
GATTACATCC CCCGTGGCAG CCCTGCGTGC GCAGCGACAC GTGACGAATT CAATCCCCAC
ACTCCGTCAT CAACTTAG
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| Protein sequence | MKSAPQENEL FRTDYLAEGL GHADRRAGLE SYCTGLMLPL SRKSVEPMAA RVDPLHASAR
HQSLHHFVSK SDWSDTALLS RVRDWVQPLL EAPSGRYWII DDTGFPKKGK HSVGVARQYC
GQLGKQDNCQ VAVSLSLATE QGSLPIAYQL YLPKEWADDA TRRQKAGVPD DIVFATKPEI
ALAQVREAIA AGVPAGVVLA DAAYGDETGF RENLTELGLL YAVGIRSTTT VWPPGVSPLP
AKPASGPGRP PKLLRRAPGH EPVSVKTLAM ALPSSAYQVV TWREGINTAL SSRFAAVRVR
PAHRDYWRST LRDEEWLLVE WPGGEAEPTK YFLSTAPADA LIEQLVFVTK MRWRIERDYQ
DLKQELGLGH YEGRGWRGFH HHATLSIAAY GFLMAERLAA DKPVGNKKNF LECQIPALPA
DYIPRGSPAC AATRDEFNPH TPSST
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