Gene RSp0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0155 
SymboltISRso9 
ID1222558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp179165 
End bp180487 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content64% 
IMG OID637240014 
ProductISRSO9-transposase protein 
Protein accessionNP_521716 
Protein GI17548376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00277876 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCCGA AGGCACCAGT CAGCGAGGGA GACTTCTTCC GGCAGCCGCT GCGCGAGCAG 
ATCAACCTGA AGCATCCGCT GGTACGCCTG GCCGATCTGA TCGACTGGGA GCGGTTGAGC
GCCGTGATGA GCGAGAGCTT CGTGTCCAAG CGCGGCCGCC CGGCCACCTC GCCACGCTTG
ATTGCTGGCT TGCTGTATTT GCAGCACGCG TTTGACCTGT CCGATGAGGA AGTCGTCTGG
CAATGGGTTG AGAACCCGTA CTGGCAGGTA TTCACTGGCG AGACGTACCT GCAGACCGAG
CCGCCGATCG ACCCGTCGAG CCTGACGCGC TGGCGCAAGC GGTTGGGCGA AGCAGGCGTG
GAAGAGCTGC TGGCCGAGAC GATCGGAGTG GCCAAACGAG CCGGGGTGAT CAAGGCCGCC
AGCATCAAGC GCGTGATCGT CGACACGACG GTGATGCCGA AGGCAATCGC ACATCCGACC
GATTCGCGCT TGCTGGAACG ATGTCGCGAG CATCTGGTGA AGGCGGCAGC CCAGCACGGG
CTAAAACTAC GACAGAACTA CAACCGCGAG GCGCCACGGC TGGCGGGCCA GATTGGCCGC
TACGCACACG CCAAGCAGTA CAAGCGCATG AAGCGCGCGC TGCGCACCTT GCGCTCGCGG
GTGGGTCGGG TGATGCGCGA CGTTGAGCGA CAGCTCGGCG CGGTGGCGGC GCAAAGCCGC
ACAGCGCTGG AAGACCTGAT TGGCCGCACC AAGCGGATTC TGTCGCAGAA GCCTAAGGAC
AAGCACAAGC TCTACGCGCT GCATGCGCCG GAGGTGGAAT GCATCAGCAA GGGCAAGGCC
AGAACGCCGT ACGAGTTCGG CGTGAAGGTG TCGATCACGA CCACACACAA GGAAGGGCTG
GTGCTGGGCG CGCGCTCGAT GCCGGGCAAT CCGTACGACG GGCACACGCT GGCCGAGGCG
CTGGAGCAGG CAGAGATTCT CAGTGACGCG CGAGCGCAGA TTGCCATCGT TGATCGTGGT
TACCGGGGCG TCGACGTTGA AGGCGTGAAG GTCTACCACC CTGGGCTTCG GCGCGGCATC
ACGCGTGGCC TGCGCGCGAT GATCCGACGG CGCAGTGCCA TCGAACCCGC CATCGGCCAC
ATGAAGGCCG ACGGCAAGCT CGACCGGAAC TGGCTCAAAG GGTCACTGGG CGACGCGATG
CATGCGGTGC TCTGCGGCGC TGGCCACAAC CTGCGCATGA TCCTGAGGAA GCTGCGGCTT
CTTTACGCCG TCATTCTTGC CGCGCTGCTT GGACGAATCC GCCCTTGTGC ATTGCCGGTA
TGA
 
Protein sequence
MGPKAPVSEG DFFRQPLREQ INLKHPLVRL ADLIDWERLS AVMSESFVSK RGRPATSPRL 
IAGLLYLQHA FDLSDEEVVW QWVENPYWQV FTGETYLQTE PPIDPSSLTR WRKRLGEAGV
EELLAETIGV AKRAGVIKAA SIKRVIVDTT VMPKAIAHPT DSRLLERCRE HLVKAAAQHG
LKLRQNYNRE APRLAGQIGR YAHAKQYKRM KRALRTLRSR VGRVMRDVER QLGAVAAQSR
TALEDLIGRT KRILSQKPKD KHKLYALHAP EVECISKGKA RTPYEFGVKV SITTTHKEGL
VLGARSMPGN PYDGHTLAEA LEQAEILSDA RAQIAIVDRG YRGVDVEGVK VYHPGLRRGI
TRGLRAMIRR RSAIEPAIGH MKADGKLDRN WLKGSLGDAM HAVLCGAGHN LRMILRKLRL
LYAVILAALL GRIRPCALPV