Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0069 |
Symbol | adhC1 |
ID | 1222617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 79046 |
End bp | 80152 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239928 |
Product | bifunctional: glutathione-dependent formaldehyde dehydrogenase/alcohol dehydrogenase class III |
Protein accession | NP_521630 |
Protein GI | 17548290 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA AAGCCGCCAT CGCCTGGAAA GCCGGTGCCC CGCTCACCGT GGAAGAAGTC GACCTGCAAG GCCCGCGCGC CGGCGAGGTG CTCGTCGAGA TCAAGGCCAC CGGCATCTGC CATACCGACT ACTACACGCT CTCGGGCGCG GACCCGGAAG GCATCTTCCC AGCCATCCTC GGGCATGAGG GTGCGGGCGT CGTGCTGGAA GTGGGTGCGG GCGTGACCTC GCTCAAGGCG GGCGACCACG TGATCCCGAT CTACACGCCG GAATGCCGCC AGTGCAAGTT CTGCCTCTCG CGCAAGACCA ACCTGTGCCA GGCGATCCGC GCCACGCAGG GCAAGGGGCT GATGCCGGAC GGCACCTCGC GCTTCTCGCT CGACGGCAAG CCGCTGTTCC ACTACATGGG CACGTCCACG TTTGCGAACC ACATCGTGGT GCCGGAGATT GCGCTCGCGA AGATCCGCCC GGACGCGCCG TTCGACAAGG TCTGCTACAT CGGCTGCGGC GTCACCACGG GCGTGGGTGC GGTGGTGTAC ACGGCCAAGG TGGAAGCCGG TGCCAACGTG GTGGTGTTCG GCCTGGGCGG CATCGGCCTG AACGTGATCC AGGGCGCCAA GATGGTCGGC GCCGACAAGA TCATCGGCGT GGACCTGAAC CCCGCGCGTG AAGCCATGGC GCGCAAATTC GGCATGACGC ACTTCATCAA CCCGAAGGAC GTCGGCAACG TGGTCGACCA CATTATCCAG CTCACGGATG GCGGCGCGGA TTACTCGTTC GAATGCATCG GCAACACGCA GGTCATGCGG CAGGCGCTGG AGTGCACCCA TAAGGGCTGG GGCCAGTCGA TCATCATCGG CGTGGCGGAA GCCGGGGCGG AGATCAGCAC GCGCCCGTTC CAGCTCGTGA CCGGCCGTGA ATGGAAAGGC TCGGCCTTTG GTGGCGCACG CGGCCGCACC GACGTGCCGA AGATCGTCGA CTGGTACATG GAAGGCAAGC TCAACATCGA CGACCTCATC ACGCACACGC TGCCGCTGGA GCGCATCAAC GAGGGCTTCG ACCTGATGAA GCGCGGCGAG TCGATCCGTT CGGTTGTCTT GTATTAA
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Protein sequence | MKTKAAIAWK AGAPLTVEEV DLQGPRAGEV LVEIKATGIC HTDYYTLSGA DPEGIFPAIL GHEGAGVVLE VGAGVTSLKA GDHVIPIYTP ECRQCKFCLS RKTNLCQAIR ATQGKGLMPD GTSRFSLDGK PLFHYMGTST FANHIVVPEI ALAKIRPDAP FDKVCYIGCG VTTGVGAVVY TAKVEAGANV VVFGLGGIGL NVIQGAKMVG ADKIIGVDLN PAREAMARKF GMTHFINPKD VGNVVDHIIQ LTDGGADYSF ECIGNTQVMR QALECTHKGW GQSIIIGVAE AGAEISTRPF QLVTGREWKG SAFGGARGRT DVPKIVDWYM EGKLNIDDLI THTLPLERIN EGFDLMKRGE SIRSVVLY
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