Gene RSp0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0065 
SymbolpurU2 
ID1222613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp74491 
End bp75363 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID637239924 
Productformyltetrahydrofolate deformylase 
Protein accessionNP_521626 
Protein GI17548286 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.957043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC CATCCCGTTC ACCATCATTC ATTCTGACGC TGTCATGCCC GAGCGCCCCC 
GGCCAAGTTG CAGCCGTCGT CGGCCTGCTT GAGCGCCACC ACTGCTACAT CGATGAACTG
AGCGTCTTTG ACGACGAACT GAGCCAGCGC TTCTTTGTCC GCTGCGTGTT TCATCCAACG
GATACGCACG CGCTACACGT CGACGACCTG CGGCAGGAAT TCGAGCCGAT CGCGCAAACC
TTCGGCATGC AGTGGGCAAT CCACGACGCC CAGGCGCGCC CGAAGGTACT CATCATGGTG
TCGAAGCTGG AGCATTGCCT TACCGATCTG CTGTTCCGCT GGCGTATGGG CGAGCTGAAG
ATGGATATCG TCGGCATTGC ATCCAACCAC CCCGACTTCG AGCCGCTGGC GCGCCAGCAT
GGCTTGCCGT TCCGCCATTT CCCGATCACC CCCGACACCA AAGCGCAACA GGAGGCGCAG
TGGCTGGACC TGCTTGAATC GAGCGGCGCG GAGCTCGTGA TTCTCGCGCG CTACATGCAG
GTGCTTTCGC CAGAGACGAG CGCGAAACTG GTGAATCGCG CAATCAACAT CCATCACTCC
TTCCTGCCCG GCTTCAAGGG TGCAAAGCCT TATCACCAGG CGCATGCACG CGGCGTCAAG
CTCATCGGTG CGACCGCACA CTTCGTGACC GACGATCTCG ACGAAGGCCC GATCATCGAG
CAGGTTGTTG AGCGCGTCGA CCACTCCTAC CGGCCTGAGC AACTGCTTGC CGTTGGTCGG
GACGTCGAAT GCCTCACACT CTCACGCGCG GTGAAGGCGT TCATTGAACG GCGCGTCTTC
CTCAACGGCG ACCGGACCGT CGTCTTCCAG TAG
 
Protein sequence
MNAPSRSPSF ILTLSCPSAP GQVAAVVGLL ERHHCYIDEL SVFDDELSQR FFVRCVFHPT 
DTHALHVDDL RQEFEPIAQT FGMQWAIHDA QARPKVLIMV SKLEHCLTDL LFRWRMGELK
MDIVGIASNH PDFEPLARQH GLPFRHFPIT PDTKAQQEAQ WLDLLESSGA ELVILARYMQ
VLSPETSAKL VNRAINIHHS FLPGFKGAKP YHQAHARGVK LIGATAHFVT DDLDEGPIIE
QVVERVDHSY RPEQLLAVGR DVECLTLSRA VKAFIERRVF LNGDRTVVFQ