Gene RSp0049 details

Gene Information

• Locus tag: RSp0049
• Symbol: soxG1
• ID: 1222597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 55047
• End bp: 55679
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637239908
• Product: sarcosine oxidase subunit gamma
• Protein accession: NP_521610
• Protein GI: 17548270
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4583] Sarcosine oxidase gamma subunit
• TIGRFAM ID: [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.507753
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTGGAATG AATCCAGAAC TGAAGCACAG ATGGGCAGCA TGATCAGCGC ACCACTCGAA 
TCGCCGTTTG TTGGCGCGGC GGATCTGCTG AAGACCCGGC AGACGCGCGC ACCCGAAAAG 
TTCACGTTGC GCGAGCGGCC CTTTCTCGAT CTCGTCAACG TGCGCGGTGA ATTGAGCGAC 
CCGGCGTTCG TTGCCGCGTT TGAGCGTGTG GTAGGTTGCC GGCCCCCGGC CGAACCCAAC 
TCGGTGGCGC GGAGCACGGA GTACGACGTG CTCTGGCTCG GCCCCGACGA ATGGCTGGTG 
CGGTCGGTCG GGCCGGTACA GGCGGGTGTG CTGGAGGCCA AGCTGGCAGA CGCCGTGCGC 
GGCTCGTACG CTGCGGCAGT GGATGTCGGC AGCGGGTACA CCGTGGTCGA GATCAGCGGG 
CAGTGCGCGC GCGATGTCTT GGCGCGCGGT TGTCCACTCG ACCTGCACCC GCGCGTGTTC 
AAGCCGGGGC AGTGTGCGCA ATCGCATTAC TTCAAGGCGT CGATCGTGCT GGTTCCGACC 
GGCAATGATG TGTATGAGCT TGTCGTCCGG CGCAGTTTTG CCGATTACTT CGTGCGCATC 
ATGCTCGACG CGGCCACGCC CTTGACGACA TGA 

 

Protein sequence

MWNESRTEAQ MGSMISAPLE SPFVGAADLL KTRQTRAPEK FTLRERPFLD LVNVRGELSD 
PAFVAAFERV VGCRPPAEPN SVARSTEYDV LWLGPDEWLV RSVGPVQAGV LEAKLADAVR 
GSYAAAVDVG SGYTVVEISG QCARDVLARG CPLDLHPRVF KPGQCAQSHY FKASIVLVPT 
GNDVYELVVR RSFADYFVRI MLDAATPLTT