| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0047 |
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| Symbol | soxD1 |
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| ID | 1222595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 51651 |
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| End bp | 51974 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239906 |
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| Product | sarcosine oxidase subunit delta |
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| Protein accession | NP_521608 |
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| Protein GI | 17548268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.495698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGA TCGAATGTCC GTGGTGCGGG CCGCGCGCCG AATCCGAGTT CTCGTGCGGC
GGTGAAGCCG ACATCGCACG TCCGCTCGAA CCCGAAACAT TGACGGACCG CGAATGGGGC
GACTACCTGT TCATGCGTGA GAACCCGCGC GGCGTTGCCC GTGAACAATG GCTGCACACG
CAAGGGTGCC GCCGCTGGTT CAAGGTCGCG CGCGACACCG TCACGTACGA CATCAAGGGC
TACGAAAAAT TTGTTGGCGC CCAGAACAGC CAGGCCGGCG GCCAACCCGA TGTCAACGCA
AAGCAAGAAG GGGCGAGCAA ATGA
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| Protein sequence | MLLIECPWCG PRAESEFSCG GEADIARPLE PETLTDREWG DYLFMRENPR GVAREQWLHT
QGCRRWFKVA RDTVTYDIKG YEKFVGAQNS QAGGQPDVNA KQEGASK
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