| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0045 |
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| Symbol | sdaA1 |
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| ID | 1222593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 48980 |
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| End bp | 50365 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239904 |
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| Product | L-serine dehydratase |
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| Protein accession | NP_521606 |
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| Protein GI | 17548266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.388959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA GCGTCTTCGA TTTGTTCAAG ATCGGCATCG GCCCGTCCAG CTCGCATACG
GTCGGGCCCA TGATTGCCGC TTGCCGCTTC GCCTCGCATA TTGAAGATAC CAACCTGCTG
GGGTTCGTCA AGTATGTGCG GGCGGAACTG TACGGGTCAC TTGGCGCAAC CGGTAAGGGG
CACGGTACCG ACAAGGCCGT GCTGCTCGGG CTGGAGGGTC ACCTGCCCGA TGTGATCGAC
CCCGACCTCA TCGAGTCGCG CCTTGCCGCA ATCCGTGCGT CCAAATCGCT GTCGCTGCTC
GGCAAGCATG CCATCCGCTT CGAGGAGAAA GAGCACATCG GTTTCTATCG AAAGCTGATG
AGCGGCACCA GCATCGTGCA CCCGAACGGC ATGCGGTTTC AGGCGTTCGA CGACAACGGC
CAGTTGCTGG TCGAGAAGGA GTATTACTCG ATCGGCGGCG GCTTTGTCGT GAACCGCGAT
GGTGATCGCG TGAACGGCGT GCGTGCGACG GCCGAGGTGC CGTATCCGTT CCGCACCGGC
GATGACTTGA TGCGGCAGTG TCGCGAGCAC GGGCTATCGA TCGCTGAACT GATGTTCCGC
AACGAATGCA CGTTGCGCGC TCCTGACGAA GTCCGTGCCG GCCTGCTCAC TATCTGGCGC
ACGATGGCCG CATGCGTGGA GCGCGGCTGC AGGGCCGAGG GCGAGCTTCC CGGCCCGATG
CGCGTGAGGC GCCGTGCGGC TGAGCTGAAC AACCGCCTGC GTGCACGATC GGAAGAATCG
CTGCGCGACC CGCTCTCGAT GCTCGACTGG GTCAACTTGT ATGCGATGGC CGTCAACGAG
GAAAACGCGG CCGGCGGGCG CGTCGTCACC GCCCCGACCA ACGGCGCCGC TGGCGTGATT
CCCGCCGTCC TCCATTACTA CGTGAAGTTC GTACCGGGCT CGACCGACAA CGGCATCGTC
GAATTCCTGC TGACCGCCGC GGCGATCGGG ATCATCTACA AGGAGACCGC GTCGATTTCC
GGCGCGGAAG TCGGCTGCCA GGGCGAGGTC GGTGTGGCGT GCTCGATGGC GGCGGCCGCG
CTTGCCGCGG TGATGGGCGG CACACCCGAT CAGGTGGAGA ACGCCGCTGA GATCGGCATG
GAGCACAACC TCGGTATGAC CTGTGACCCG GTCGGCGGGC TGGTGCAGAT TCCGTGCATC
GAGCGCAATG CGATGGGCGC GATCAAGGCG CTCAACGCGT CGCGCATGGC GCTCAAGGGC
AATGGCCAGC ATTACGTGTC GCTCGACTCC GTCATCAAGA CGATGCGCGA GACCGGTGCT
GATATGAAAA CGAAATACAA GGAAACGTCG CGCGGCGGTT TGGCTGTGAA CGTGATCGAA
TGCTAA
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| Protein sequence | MNVSVFDLFK IGIGPSSSHT VGPMIAACRF ASHIEDTNLL GFVKYVRAEL YGSLGATGKG
HGTDKAVLLG LEGHLPDVID PDLIESRLAA IRASKSLSLL GKHAIRFEEK EHIGFYRKLM
SGTSIVHPNG MRFQAFDDNG QLLVEKEYYS IGGGFVVNRD GDRVNGVRAT AEVPYPFRTG
DDLMRQCREH GLSIAELMFR NECTLRAPDE VRAGLLTIWR TMAACVERGC RAEGELPGPM
RVRRRAAELN NRLRARSEES LRDPLSMLDW VNLYAMAVNE ENAAGGRVVT APTNGAAGVI
PAVLHYYVKF VPGSTDNGIV EFLLTAAAIG IIYKETASIS GAEVGCQGEV GVACSMAAAA
LAAVMGGTPD QVENAAEIGM EHNLGMTCDP VGGLVQIPCI ERNAMGAIKA LNASRMALKG
NGQHYVSLDS VIKTMRETGA DMKTKYKETS RGGLAVNVIE C
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