| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0041 |
|---|
| Symbol | TIS1421a |
|---|
| ID | 1222589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 45892 |
|---|
| End bp | 46296 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637239900 |
|---|
| Product | TIS1421-transposase protein A |
|---|
| Protein accession | NP_521602 |
|---|
| Protein GI | 17548262 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAA AGAAGATCAG CAATGAACTG TGGAAGGCAT TGCAACCGCT GCTGCCGGTT
GTGGAGCCTT CGACCAAAGG CGGTCGTCCG CGCGTGGATG ATCGGGCGGC GCTCAACGGC
ATCCTGTTTG TTCTGCATAC CGGTATCCCG TGGGAAGACC TGCCGAAAGA ACTGGGCTTT
GGCAGCGGCA TGACGTGCTG GCGTCGCCTG CGGGAGTGGC AGGCCAACGG CGTTTGGGAG
CGGCTGCATT TGGCTCTGCT CAAGCGCCTA CGCGAACACG ACCAGATCGA CTGGAGCCGA
GCCAGTGTCG ACGGTGCAAC GGTGGCCAGC CCCCGGGGGG CGAGCAGACG GGGCCGAATC
CAACGGATCG CGGCAAGCTC GGTAGCAAGC GCCATCTCGT CGTAG
|
|---|
| Protein sequence | MARKKISNEL WKALQPLLPV VEPSTKGGRP RVDDRAALNG ILFVLHTGIP WEDLPKELGF
GSGMTCWRRL REWQANGVWE RLHLALLKRL REHDQIDWSR ASVDGATVAS PRGASRRGRI
QRIAASSVAS AISS
|
|---|
| |