Gene RSp0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0009 
SymboldctD1 
ID1222638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp11287 
End bp12651 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content71% 
IMG OID637239868 
Productresponse regulator of the C4-dicarboxylate transport two-component regulatory system transcription regulator protein 
Protein accessionNP_521570 
Protein GI17548230 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.313287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA CCCCTTTCTC TTCCGAGCTG TCGTCCGCCG CCGACCTTGC GCCGGTCTTC 
CTGATCGAAG ACGACGACGT GGTGCGCCTG GGCTGCGAGC AAGCGCTCAC CCTGGCGGAC
CTGCCGGTGC GGCCCTTCGC CGATGCCGAG AGCGCGCTGG CCGCGCTGGC CGCGCAGACG
CCGTCCGTGG TGGTGAGCGA CGTCCGGCTG CCCGGCCGCG ACGGCCTGGC CGTGCTGCGC
GAGATGCTGC GGCACGATCG CCAGTTGCCG GTCATCCTGG TCACCGGTCA CGGCGATGTG
TCGATGGCCG TGACGGCCAT GCGTGCCGGC GCGTACGACT TCATCGAAAA GCCGTTCCAC
TCCGAGCGCC TGGTCGATGT GGTGCGGCGC GCGCTGGAGA AGCGCAGGCT CACCGCCGAG
AACCTGCGCC TGCGCGCGGC GCTGCAGGGC CGCCAGGCGT TTGCGCTGGT CGGCCAGAGC
CAGACCATGC AGGACGTGCG CCGCCTGGTG GCGGCGCTGG CGCCGACCGA TGCCGACATC
CTGGTCACCG GCGAGACCGG CGCGGGCAAG GACGTGCTCG CGCGCGCCAT CCACGAAGGC
AGCCGGCGGC GCGGGCCGTT CGTCGCGCTC AATTGCGCGG CGCTGCCGGA GTCCGTCTTC
GAGAGCGAGA TGTTCGGCCA CGAGGCGGGC GCCTTCACCG GCGCCAACCG CCGGCGCATC
GGCAAGATGG AATATGCCGA CGGCGGCACG CTGTTCCTCG ACGAGATCGA ATCGATGCCG
CTGGCGCTGC AGGCCAAGCT GCTGCGCGCG CTGCAGGAGC GCAGCATCGA GCGGCTGGGC
AGCAATGCCA GCGTGCCGGT CGACTGCCGC GTGGTGGCGG CGGCCAAGGT GGACCTGAAG
GCGGCGGCCG ATCATGGCGC GTTCCGCGCC GACCTGTACT ACCGGCTGAA CGTGGTGTCG
ATCGCGCTGC CGCCGCTGCG CCAGCGCGCC GAGGACATCC CGCTGCTGAT GGCGCATTTC
CTGCAGCAGG CGGCGTTGCG CTACGACCGC GCGGCGCCCG ACTGGAGCGC GCAGGACATG
ATGCGCTGGC AGCACCACGA CTGGCCCGGC AATGTGCGCG AATTGAAGAA CGTGGCCGAA
CGCTTCTGCC TGGGCCTGGA CGATGGCCTG ATCGCCTCCG AAGCGAGCCA GCACTCACTG
GCCGGCCGCA TGATGGCGGT CGAGCGCGCC ACCATCGAAG AGGCCTTGCG CGCCACCGAA
GGCAGCGTCG CCCGCGCGGC CGACCTGCTG GCGGTGCCGC GCAAGACGCT GTACGACAAG
CTGAACCGGC ACGGCATCGA GCCGGAGCGC TTTCGCGCCG GCTGA
 
Protein sequence
MPDTPFSSEL SSAADLAPVF LIEDDDVVRL GCEQALTLAD LPVRPFADAE SALAALAAQT 
PSVVVSDVRL PGRDGLAVLR EMLRHDRQLP VILVTGHGDV SMAVTAMRAG AYDFIEKPFH
SERLVDVVRR ALEKRRLTAE NLRLRAALQG RQAFALVGQS QTMQDVRRLV AALAPTDADI
LVTGETGAGK DVLARAIHEG SRRRGPFVAL NCAALPESVF ESEMFGHEAG AFTGANRRRI
GKMEYADGGT LFLDEIESMP LALQAKLLRA LQERSIERLG SNASVPVDCR VVAAAKVDLK
AAADHGAFRA DLYYRLNVVS IALPPLRQRA EDIPLLMAHF LQQAALRYDR AAPDWSAQDM
MRWQHHDWPG NVRELKNVAE RFCLGLDDGL IASEASQHSL AGRMMAVERA TIEEALRATE
GSVARAADLL AVPRKTLYDK LNRHGIEPER FRAG