Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0009 |
Symbol | dctD1 |
ID | 1222638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 11287 |
End bp | 12651 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239868 |
Product | response regulator of the C4-dicarboxylate transport two-component regulatory system transcription regulator protein |
Protein accession | NP_521570 |
Protein GI | 17548230 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.313287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACA CCCCTTTCTC TTCCGAGCTG TCGTCCGCCG CCGACCTTGC GCCGGTCTTC CTGATCGAAG ACGACGACGT GGTGCGCCTG GGCTGCGAGC AAGCGCTCAC CCTGGCGGAC CTGCCGGTGC GGCCCTTCGC CGATGCCGAG AGCGCGCTGG CCGCGCTGGC CGCGCAGACG CCGTCCGTGG TGGTGAGCGA CGTCCGGCTG CCCGGCCGCG ACGGCCTGGC CGTGCTGCGC GAGATGCTGC GGCACGATCG CCAGTTGCCG GTCATCCTGG TCACCGGTCA CGGCGATGTG TCGATGGCCG TGACGGCCAT GCGTGCCGGC GCGTACGACT TCATCGAAAA GCCGTTCCAC TCCGAGCGCC TGGTCGATGT GGTGCGGCGC GCGCTGGAGA AGCGCAGGCT CACCGCCGAG AACCTGCGCC TGCGCGCGGC GCTGCAGGGC CGCCAGGCGT TTGCGCTGGT CGGCCAGAGC CAGACCATGC AGGACGTGCG CCGCCTGGTG GCGGCGCTGG CGCCGACCGA TGCCGACATC CTGGTCACCG GCGAGACCGG CGCGGGCAAG GACGTGCTCG CGCGCGCCAT CCACGAAGGC AGCCGGCGGC GCGGGCCGTT CGTCGCGCTC AATTGCGCGG CGCTGCCGGA GTCCGTCTTC GAGAGCGAGA TGTTCGGCCA CGAGGCGGGC GCCTTCACCG GCGCCAACCG CCGGCGCATC GGCAAGATGG AATATGCCGA CGGCGGCACG CTGTTCCTCG ACGAGATCGA ATCGATGCCG CTGGCGCTGC AGGCCAAGCT GCTGCGCGCG CTGCAGGAGC GCAGCATCGA GCGGCTGGGC AGCAATGCCA GCGTGCCGGT CGACTGCCGC GTGGTGGCGG CGGCCAAGGT GGACCTGAAG GCGGCGGCCG ATCATGGCGC GTTCCGCGCC GACCTGTACT ACCGGCTGAA CGTGGTGTCG ATCGCGCTGC CGCCGCTGCG CCAGCGCGCC GAGGACATCC CGCTGCTGAT GGCGCATTTC CTGCAGCAGG CGGCGTTGCG CTACGACCGC GCGGCGCCCG ACTGGAGCGC GCAGGACATG ATGCGCTGGC AGCACCACGA CTGGCCCGGC AATGTGCGCG AATTGAAGAA CGTGGCCGAA CGCTTCTGCC TGGGCCTGGA CGATGGCCTG ATCGCCTCCG AAGCGAGCCA GCACTCACTG GCCGGCCGCA TGATGGCGGT CGAGCGCGCC ACCATCGAAG AGGCCTTGCG CGCCACCGAA GGCAGCGTCG CCCGCGCGGC CGACCTGCTG GCGGTGCCGC GCAAGACGCT GTACGACAAG CTGAACCGGC ACGGCATCGA GCCGGAGCGC TTTCGCGCCG GCTGA
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Protein sequence | MPDTPFSSEL SSAADLAPVF LIEDDDVVRL GCEQALTLAD LPVRPFADAE SALAALAAQT PSVVVSDVRL PGRDGLAVLR EMLRHDRQLP VILVTGHGDV SMAVTAMRAG AYDFIEKPFH SERLVDVVRR ALEKRRLTAE NLRLRAALQG RQAFALVGQS QTMQDVRRLV AALAPTDADI LVTGETGAGK DVLARAIHEG SRRRGPFVAL NCAALPESVF ESEMFGHEAG AFTGANRRRI GKMEYADGGT LFLDEIESMP LALQAKLLRA LQERSIERLG SNASVPVDCR VVAAAKVDLK AAADHGAFRA DLYYRLNVVS IALPPLRQRA EDIPLLMAHF LQQAALRYDR AAPDWSAQDM MRWQHHDWPG NVRELKNVAE RFCLGLDDGL IASEASQHSL AGRMMAVERA TIEEALRATE GSVARAADLL AVPRKTLYDK LNRHGIEPER FRAG
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