| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0002 |
|---|
| Symbol | cspD3 |
|---|
| ID | 1222631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 3120 |
|---|
| End bp | 3323 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637239861 |
|---|
| Product | cold shock-like transcription regulator protein |
|---|
| Protein accession | NP_521563 |
|---|
| Protein GI | 17548223 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000106276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGG GTACTGTCAA ATGGTTTAAC GAAACCAAAG GCTTCGGCTT CATCACTCCG
GACGGCGGTG GCGCGGATCT GTTCGCACAC TTCTCGGAAA TTCAGGGCTC CGGCTTTAAG
ACCCTGAAGG ACGGCCAGAA GGTGTCCTTC GAAGTGAAGC AAGGCCCGAA GGGCCTGCAA
GCCTCGGGTA TCAAGCCGGA ATAA
|
|---|
| Protein sequence | MATGTVKWFN ETKGFGFITP DGGGADLFAH FSEIQGSGFK TLKDGQKVSF EVKQGPKGLQ
ASGIKPE
|
|---|
| |