Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0002 |
Symbol | cspD3 |
ID | 1222631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 3120 |
End bp | 3323 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637239861 |
Product | cold shock-like transcription regulator protein |
Protein accession | NP_521563 |
Protein GI | 17548223 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000106276 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGG GTACTGTCAA ATGGTTTAAC GAAACCAAAG GCTTCGGCTT CATCACTCCG GACGGCGGTG GCGCGGATCT GTTCGCACAC TTCTCGGAAA TTCAGGGCTC CGGCTTTAAG ACCCTGAAGG ACGGCCAGAA GGTGTCCTTC GAAGTGAAGC AAGGCCCGAA GGGCCTGCAA GCCTCGGGTA TCAAGCCGGA ATAA
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Protein sequence | MATGTVKWFN ETKGFGFITP DGGGADLFAH FSEIQGSGFK TLKDGQKVSF EVKQGPKGLQ ASGIKPE
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