| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0001 |
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| Symbol | repA |
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| ID | 1222630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1219 |
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| End bp | 2244 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637239860 |
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| Product | REPA replicase protein |
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| Protein accession | NP_521562 |
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| Protein GI | 17548222 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000644279 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCCGGCC GCATCATCGT GCCCTCGGGG GGCCAGGTCA TTGCCACACC GGAAAAATTC
CAGCGCCTCT TCGACGAAGC GCAGGCCATG GAACGCGAAG ATGCCTGGCA GAGCGGCGAG
GTCGGTTTCC TCAGTCGCGC CAGCGTGCAA GTCACCCTCC CCTACCGCGC GCCGAAAGGG
TCGCCGCCCG TGTGGACACG CTCGAGCGGC AACATCTCCC TGATGATCCA GCCGGGCTAT
TTCACCCAGC AACGATCTGA GCGCGCCAGC AATGGGCGGC AGCGCATCGT GTCCGAGACC
GTTTCCTTCG GCTATCCGTA TGGCTCCTAT CCCCGGCTGA TGCTGGCCTG GATCGGCAAG
GAAATCATGG CGAAGAAGAA GCGCGGTGAA TTTCAGGGCA CCGTCGAAGA CCGCCGCATT
TCGCTAGGCA ATTCGCTGTC CGAGTTCATG TACAACCTGG GCATTCCGAT GGCCACGGGC
GGCAAGCGCG GCACGATGAC GCTCGTCCGC CAGCAGATGA TCCGCCTGTT TTCGGCAACC
ATCGCGATCG TCCAGAACAA GTCCGCTCCC AACAACCAGA ACCAAGAACC GTTGTCGATC
GATCGGATCG GCTATCTCCT GGCCGATCAG TTGTCGACCT GGTGGGATCC GATGCAGCCG
GGCCAAGGGT CAATGTTCGA GAGCTTCGTC GTGCTTTCCG AACCGTTTTT CAACGAGCTG
GTGAACCGTC CGGTGCCTGT CGACATGCGC GCGCTGAAAG CGCTTAAGCA GTCTCCATTC
GCGCTCGACG TGTATTCGTG GCTGACTTAT CGCTTCTTCA CGATCCAGAA GCGGACCGAG
ATCCCCTGGG AAGCCCTGCA GATGCAGTTC GGTACCGAGA CGGAAAGCGA ACGCAAATTC
CGAGCGCTCT TCCGTAAGGC GTTGAAGGAC GTGCTGGTGG TGTATCCAGA CGCAAAGGTC
GATGCCGACT CTTCCAAGGC GCTGATCCTG CAGCCGTCAC GCACGAGTGT GCGCAAGCTC
GCCTGA
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| Protein sequence | MPGRIIVPSG GQVIATPEKF QRLFDEAQAM EREDAWQSGE VGFLSRASVQ VTLPYRAPKG
SPPVWTRSSG NISLMIQPGY FTQQRSERAS NGRQRIVSET VSFGYPYGSY PRLMLAWIGK
EIMAKKKRGE FQGTVEDRRI SLGNSLSEFM YNLGIPMATG GKRGTMTLVR QQMIRLFSAT
IAIVQNKSAP NNQNQEPLSI DRIGYLLADQ LSTWWDPMQP GQGSMFESFV VLSEPFFNEL
VNRPVPVDMR ALKALKQSPF ALDVYSWLTY RFFTIQKRTE IPWEALQMQF GTETESERKF
RALFRKALKD VLVVYPDAKV DADSSKALIL QPSRTSVRKL A
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